Nice View of CleanEx Exp : GSE1682_DOC

[General] [References] [Expression data]

General information about the entry
Dataset code GSE1682
Dataset Title Global gene expression analysis of human glioma (Hs 683) cell lines exposed to candoxin
Description Total RNA was isolated from candoxin-treated (n = 3 flasks of each time points - 12hrs, 24hrs and 48hrs) and untreated control (n = 3) cells using RNeasy® mini kit.The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA)..
Organism Homo sapiens
Format Type Intensity
Affymetrix;HG-U133A
Number of Experiments 12
Maximum log 8.32807431893982
Minimum log -7.72102930184847
References
Original URL http://www.ncbi.nlm.nih.gov/projects/geo/query/acc.cgi?acc=GSE1682
Paper Reference Pachiappan A et al. Toxicon. 2005 Dec 15;46(8):883-99. Epub 2005 Nov 23.
MEDLINE Reference 16309724
Experiments
Experiment numberExperiment CodeExperiment Description
1GSE1682_GSM28995Hs 683 Control-1;Total RNA was isolated from untreated control (n = 3 flasks) cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA).Replicate-1";
2GSE1682_GSM28996Hs 683 Control-2;Total RNA was isolated from untreated control (n = 3flasks) cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA).Replicate-2";
3GSE1682_GSM28997Hs 683 Control-3;Total RNA was isolated from untreated control (n = 3 flasks) cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA).Replicate-3";
4GSE1682_GSM28998Hs 683 glioma cell lines 12hrs-1 time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-1";
5GSE1682_GSM28999Hs 683 glioma cell lines 12hrs time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-2";
6GSE1682_GSM29000Hs 683 glioma cell lines 12hrs time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-3";
7GSE1682_GSM29001Hs 683 glioma cell lines 24hrs time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-1";
8GSE1682_GSM29002Hs 683 glioma cell lines 24hrs time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-2";
9GSE1682_GSM29003Hs 683 glioma cell lines 24hrs time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-3";
10GSE1682_GSM29004Hs 683 glioma cell lines 48hrs-1 time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-1";
11GSE1682_GSM29005Hs 683 glioma cell lines 48hrs-2 time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-2";
12GSE1682_GSM29006Hs 683 glioma cell lines 48hrs-3 time point;Total RNA was isolated from candoxin-treated (n = 3 flasks for each replicate)Hs 683 glioma cells using RNeasy® mini kit. The preparation and processing of labeled, fragmented cRNA for oligonucleotide mcroarray hybridization has been performed according to the manufacturer’s protocols described in the technical manual (Affymetrix, Santa Clara, CA). Replicate-3";