Nice View of CleanEx: MM_PDPN

General information about the entry

Entry name  MM_PDPN Locus  4 E1 Description of the gene  Podoplanin.

Cross-references

Entrez GeneID  14726 Genomic contig  NC_000070. Position of TSS : 142889409 on minus strand (based on ANNOTATION)  NT_094216. Position of TSS : 9596 on plus strand (based on ANNOTATION)  NT_162293. Position of TSS : 811608 on minus strand (based on ANNOTATION) Unigene  Mm.2976 MGD MGI:103098 RefSeq  NM_010329  SWISSPROT  Q62011(PDPN_MOUSE)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for MM_PDPN GSE97  90  10089  Large-scale analysis of the mouse transcriptome  11904358 GSE272A  68  6584  T and B lymphocyte development profiles  12538694 GSE1148  48  22690  Sex Specific Transciption in Mouse Tissues   GSE2031  44  12488  Identification of genes and quantitative trait loci (QTL) that...   GSE2195  42  12488  Phenotypic Anchoring of Gene Expression Changes during...  15598610 GSE1025  36  12488  Hindlimb muscle, comparison of wild type and mdx mice, 7 to 112...  12874102 GSE1026  36  12488  Diaphram, comparison of wild type and mdx mice, 7 to 112 Days...  14681298 GSE1479  36  45101  C57BL/6 Benchmark Set for Early Cardiac Development   GSE1093  31  12488  caloric restriction  15039484

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for MM_PDPN GSE1581  87  58647  MPSS mouse transcriptome analysis project   GSE1316  25  112043  IL-10-conditioned dendritic cells elicit innate inflammatory...  14764687 MMEST  17  18803  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE1067  6  19086  MPSS analysis of mouse BLK CL.4 and liver cells   GSE205  6  36378  Mouse T helper cell clones  11801640 GSE348  5  35732  SAGE analysis of mouse brain regions  12840043 GSE1091  4  56812  Adipose tissue of gonadectomized mice injected with...  15525599 GSE206  4  35003  CD4/CD25 subsets of mouse spleen  12023351 GSE2122  4  77950  Skeletal muscle of glucocorticoid deprived and treated mice by...  15716308

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for MM_PDPN GSE3165B  122  20571  Identification of conserved gene expression features across...   GSE2008  107  17556  Expression profiling of liver tissue from C57BL6 x DBA strain...  12646919 GSE1863  96  15839  Dual Ligand Effects   GSE1560  54  19407  Aortas of mice on high fat diet  15550693 GSE1840  54  11129  Identification of central nervous system genes involved in the...  15483264 GSE1438  50  17576  Differential Gene Expression due to direct effects of IL-13 on...  16083784 GSE1533  42  21996  In vivo selection of diverging tumor phenotypes   GSE1098  36  15840  Effect of LPS and LPS-binding protein treatment on RAW 264.4...  16982864 GSE1574  36  15047  Time-course of mdx and wild type mice

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for MM_PDPN GSE11  28  39081  NOD model of type 1 diabetes  11827943 GSE1503  26  10011  Male/Female BALB/c Mouse...  15668334 GSE1582  18  10011  Male BALB/c Mouse Testosterone-Treated...  16186348 GSE12  13  39081  Group1   GSE15  11  39080  Group2   GSE2054  10  21881  Quantitative microarray profiling of alternative splicing in...   GSE1367  6  10011  Simulated Microgravity Inhibits Differentiation and Alters Gene...   GSE1133C  122  31373  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AJ250246.1; AJ250246. [EMBL / GenBank / DDBJ] AJ297944.2; AJ297944. [EMBL / GenBank / DDBJ] BC026551.1; BC026551. [EMBL / GenBank / DDBJ] M73748.1; M73748. [EMBL / GenBank / DDBJ] M96645.1; M96645. [EMBL / GenBank / DDBJ]