Nice View of CleanEx: HS_ZNF683

General information about the entry

Entry name  HS_ZNF683 Locus  1p36.11 Description of the gene  Zinc finger protein 683.

Cross-references

Entrez GeneID  257101 Genomic contig  AC_000044. Position of TSS : 25095610 on minus strand (based on ANNOTATION)  AC_000133. Position of TSS : 24953289 on minus strand (based on ANNOTATION)  NC_000001. Position of TSS : 26571852 on minus strand (based on ANNOTATION)  NT_004610. Position of TSS : 9523607 on minus strand (based on ANNOTATION)  NW_001838576. Position of TSS : 598111 on minus strand (based on ANNOTATION)  NW_921351. Position of TSS : 956468 on minus strand (based on ANNOTATION) Unigene  Hs.353208 Genew  HGNC:28495; ZNF683 GeneCards  ZNF683 Ensembl  ZNF683 RefSeq  NM_001114759   NM_173574  SWISSPROT  Q8IZ20(ZN683_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF683 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB   GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF683 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE41  4  36402  Effects of estrogen  11085516 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2056  3  29318  PBECs stimulated with pro-inflammatory cytokines and P....  15701729

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF683 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE4268  125  44748  Breast and ovarian carcinoma  12960427 GSE2193  123  47017  Normal_human_tissues  15774023

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF683 GSE137  70  10368  Natural variation in human gene expression assessed in...  12567189 GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217 GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL BC028731.2; BC028731. [EMBL / GenBank / DDBJ] BC029505.1; BC029505. [EMBL / GenBank / DDBJ]