Nice View of CleanEx: HS_ZNF439

General information about the entry

Entry name  HS_ZNF439 Locus  19p13.2 Description of the gene  Zinc finger protein 439.

Cross-references

Entrez GeneID  90594 Genomic contig  AC_000062. Position of TSS : 11871217 on plus strand (based on ANNOTATION)  AC_000151. Position of TSS : 11554900 on minus strand (based on ANNOTATION)  NC_000019. Position of TSS : 11837843 on plus strand (based on ANNOTATION)  NT_011295. Position of TSS : 3239645 on plus strand (based on ANNOTATION)  NW_001838483. Position of TSS : 2724082 on minus strand (based on ANNOTATION)  NW_927195. Position of TSS : 3087463 on plus strand (based on ANNOTATION) Unigene  Hs.528731 Genew  HGNC:20873; ZNF439 GeneCards  ZNF439 Ensembl  ZNF439 RefSeq  NM_152262  SWISSPROT  Q8NDP4(ZN439_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF439 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF439 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF439 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE1647  83  20112  Prediction of toxicant-specific gene expression signatures...  15598611 GSE763  75  20068  Cell-type specific responses to chemotherapeutics in breast...  15205334 GSE112A  47  31487  Distinctive gene expression patterns in gastrointestinal...   GSE5803  29  12477  gene differentially expressed in androgen independent prostate...   GSE3762A  24  20496  Effects of Estrogen and Tamoxifen on Ishikawa cells after 24h...   GSE569  15  35486  Genes regulated by inflammatory cytokines in five primary...   GSE2155  10  38714  Microarray Analysis of Gene Expression in Human Normal and...  15659406 GSE2035  8  35698  Hearts_DD_Screening

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ZNF439 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE1510  5  34030  Human UniGene Set RZPD 1 - Zipf's Normalization   GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AF024693.1; AF024693. [EMBL / GenBank / DDBJ] AK027542.1; AK027542. [EMBL / GenBank / DDBJ] AK094739.1; AK094739. [EMBL / GenBank / DDBJ] BC032857.1; BC032857. [EMBL / GenBank / DDBJ]