Nice View of CleanEx: HS_VPS33A

General information about the entry

Entry name  HS_VPS33A Locus  12q24.31 Description of the gene  Vacuolar protein sorting 33 homolog A (S. cerevisiae). Old gene names  "vacuolar protein sorting 33A (yeast)"

Cross-references

Entrez GeneID  65082 Genomic contig  AC_000055. Position of TSS : 122340911 on minus strand (based on ANNOTATION)  AC_000144. Position of TSS : 119676859 on plus strand (based on ANNOTATION)  NC_000012. Position of TSS : 121317020 on minus strand (based on ANNOTATION)  NT_009755. Position of TSS : 161000 on minus strand (based on ANNOTATION)  NW_001838064. Position of TSS : 6231864 on plus strand (based on ANNOTATION)  NW_925395. Position of TSS : 69964740 on minus strand (based on ANNOTATION) Unigene  Hs.592009 MIM  610034 Genew  HGNC:18179; VPS33A GeneCards  VPS33A Ensembl  VPS33A RefSeq  NM_022916  SWISSPROT  Q96AX1(VP33A_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_VPS33A GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142 GSE1485  355  8793  Natural variation in human gene expression  15269782 GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012 GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694 GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...   GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_VPS33A GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_VPS33A R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_VPS33A GSE2845  311  24479  Human breast tumor   GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...   GSE2143  51  14443  Human coronary artery study  15942018 GSE2046  42  12426  Hep3B time-course   GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...

RNA sequences according to Unigene available on : June 11 2008

EMBL AF439857.1; AF439857. [EMBL / GenBank / DDBJ] AK026048.1; AK026048. [EMBL / GenBank / DDBJ] AK026840.1; AK026840. [EMBL / GenBank / DDBJ] BC016617.1; BC016617. [EMBL / GenBank / DDBJ]