Nice View of CleanEx: HS_USP31

General information about the entry

Entry name  HS_USP31 Locus  16p12.1 Description of the gene  Ubiquitin specific peptidase 31. Old gene names  "ubiquitin specific protease 31"

Cross-references

Entrez GeneID  57478 Genomic contig  AC_000059. Position of TSS : 21938332 on minus strand (based on ANNOTATION)  AC_000148. Position of TSS : 21162233 on plus strand (based on ANNOTATION)  NC_000016. Position of TSS : 23068091 on minus strand (based on ANNOTATION)  NT_010393. Position of TSS : 14473669 on minus strand (based on ANNOTATION)  NW_001838400. Position of TSS : 310537 on plus strand (based on ANNOTATION)  NW_926217. Position of TSS : 458536 on minus strand (based on ANNOTATION) Unigene  Hs.183817 Genew  HGNC:20060; USP31 GeneCards  USP31 Ensembl  USP31 RefSeq  NM_020718  SWISSPROT  Q70CQ4(UBP31_HUMAN)   Q86UV5(UBP48_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_USP31 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_USP31 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_USP31 R0002  295  24469  Survival in breast cancer.  12490681 GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE4268  125  44748  Breast and ovarian carcinoma  12960427 GSE2193  123  47017  Normal_human_tissues  15774023 GSE4335  122  46999  Norway/Stanford Breast Tumors  12829800 GSE3901  120  45982  Response of quiescent human fibroblasts to different growth...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_USP31 GSE2845  311  24479  Human breast tumor   GSE4056  190  2895  Expression profiling of human primary breast cancer tissue...  16622258 GSE2143  51  14443  Human coronary artery study  15942018 GSE4716A  50  5352  Gene expression-based, individualized outcome prediction for...  15064725 GSE2046  42  12426  Hep3B time-course   GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1434  32  11519  HaCaT +GLI1/2 24/72h  16434164 GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692

RNA sequences according to Unigene available on : June 11 2008

EMBL AB033029.1; AB033029. [EMBL / GenBank / DDBJ] AJ586135.2; AJ586135. [EMBL / GenBank / DDBJ] AK057491.1; AK057491. [EMBL / GenBank / DDBJ] AK092790.1; AK092790. [EMBL / GenBank / DDBJ] AK126752.1; AK126752. [EMBL / GenBank / DDBJ] U52050.1; U52050. [EMBL / GenBank / DDBJ]