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Nice View of CleanEx : HS_TRAF3IP2

Nice View of CleanEx: HS_TRAF3IP2

This viewer shows only the top ten expression datasets of each type linked to HS_TRAF3IP2

To see the full entry, go to HS_TRAF3IP2 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_TRAF3IP2
Locus  6q21
Description of the gene  TRAF3 interacting protein 2.
Old gene names  "chromosome 6 open reading frame 5", "chromosome 6 open reading frame 2"
Cross-references
Entrez GeneID  10758
Genomic contig  AC_000049. Position of TSS : 112673895 on minus strand (based on ANNOTATION)
 AC_000138. Position of TSS : 109452750 on plus strand (based on ANNOTATION)
 NC_000006. Position of TSS : 112034013 on minus strand (based on ANNOTATION)
 NT_025741. Position of TSS : 16096749 on minus strand (based on ANNOTATION)
 NW_001838990. Position of TSS : 45622992 on plus strand (based on ANNOTATION)
 NW_923184. Position of TSS : 44742499 on minus strand (based on ANNOTATION)
Unigene  Hs.654708
MIM  607043
Genew  HGNC:1343; TRAF3IP2
GeneCards  TRAF3IP2
Ensembl  TRAF3IP2
RefSeq
 NM_147200   NM_147686 
SWISSPROT
 O43734(CIKS_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TRAF3IP2
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE2350  336  12600  Normal and transformed human mature B cells  15778709
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
GSE2034  286  22283  Breast cancer relapse free survival  15721472
GSE3494A  251  22283  An expression signature for p53 in breast cancer predicts...  16141321
GSE7390  198  22283  Strong Time Dependence of the 76-Gene Prognostic Signature  17545524
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TRAF3IP2
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TRAF3IP2
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2741  164  28195  Breast Tumor's study  16230372
GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...  
GSE4268  125  44748  Breast and ovarian carcinoma  12960427
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TRAF3IP2
GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...  
GSE2143  51  14443  Human coronary artery study  15942018
GSE4716A  50  5352  Gene expression-based, individualized outcome prediction for...  15064725
GSE2046  42  12426  Hep3B time-course  
GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...  
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596
GSE1836  20  5351  Comparison of native versus cultured RPE cells  16234463
RNA sequences according to Unigene available on : June 11 2008
EMBL AF085921.1; AF085921. [EMBL / GenBank / DDBJ]
AF136405.1; AF136405. [EMBL / GenBank / DDBJ]
AF136406.1; AF136406. [EMBL / GenBank / DDBJ]
AF136407.1; AF136407. [EMBL / GenBank / DDBJ]
AF272151.1; AF272151. [EMBL / GenBank / DDBJ]
AF274303.1; AF274303. [EMBL / GenBank / DDBJ]
AK025351.1; AK025351. [EMBL / GenBank / DDBJ]
AK026602.1; AK026602. [EMBL / GenBank / DDBJ]
BC002823.2; BC002823. [EMBL / GenBank / DDBJ]
Last update March 2014