Nice View of CleanEx : HS_TCAP

Nice View of CleanEx: HS_TCAP

This viewer shows only the top ten expression datasets of each type linked to HS_TCAP

To see the full entry, go to HS_TCAP full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_TCAP
Locus  17q12
Description of the gene  Titin-cap (telethonin).
Old gene names  "limb girdle muscular dystrophy 2G (autosomal recessive)"
Cross-references
Entrez GeneID  8557
Genomic contig  NT_010755. Position of TSS : 1545897 on plus strand (based on EPD)
Unigene  Hs.514146
MIM  604488
Genew  HGNC:11610; TCAP
GeneCards  TCAP
Ensembl  TCAP
RefSeq
 NM_003673 
SWISSPROT
 O15273(TELT_HUMAN) 
EPD
 EP73587(HS_TCAP) 
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TCAP
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142
GSE1485  355  8793  Natural variation in human gene expression  15269782
GSE2350  336  12600  Normal and transformed human mature B cells  15778709
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
GSE2034  286  22283  Breast cancer relapse free survival  15721472
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TCAP
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TCAP
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893
GSE2741  164  28195  Breast Tumor's study  16230372
GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...  
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_TCAP
GSE2845  311  24479  Human breast tumor  
GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...  
GSE2143  51  14443  Human coronary artery study  15942018
GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...  
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE465F  30  4507  Expression profiling in the muscular dystrophies  11121445
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
RNA sequences according to Unigene available on : June 11 2008
EMBL AJ000491.1; AJ000491. [EMBL / GenBank / DDBJ]
AK096328.1; AK096328. [EMBL / GenBank / DDBJ]
BC012628.1; BC012628. [EMBL / GenBank / DDBJ]
BC013330.1; BC013330. [EMBL / GenBank / DDBJ]