Nice View of CleanEx : HS_SOX12

Nice View of CleanEx: HS_SOX12

This viewer shows only the top ten expression datasets of each type linked to HS_SOX12

To see the full entry, go to HS_SOX12 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



  

General information about the entry
Entry name  HS_SOX12
Locus  20p13
Description of the gene  SRY (sex determining region Y)-box 12.
Old gene names  "SRY (sex determining region Y)-box 22"
Cross-references
Entrez GeneID  6666
Genomic contig  AC_000063. Position of TSS : 401078 on plus strand (based on ANNOTATION)
 AC_000152. Position of TSS : 257663 on plus strand (based on ANNOTATION)
 NC_000020. Position of TSS : 254238 on plus strand (based on ANNOTATION)
 NT_011387. Position of TSS : 246238 on plus strand (based on ANNOTATION)
 NW_001838652. Position of TSS : 257663 on plus strand (based on ANNOTATION)
 NW_927317. Position of TSS : 258254 on plus strand (based on ANNOTATION)
Unigene  Hs.43627
MIM  601947
Genew  HGNC:11198; SOX12
GeneCards  SOX12
Ensembl  SOX12
RefSeq
 NM_006943 
SWISSPROT
 O15370(SOX12_HUMAN)   O60248(SOX15_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_SOX12
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142
GSE1485  355  8793  Natural variation in human gene expression  15269782
GSE2350  336  12600  Normal and transformed human mature B cells  15778709
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_SOX12
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_SOX12
R0002  295  24469  Survival in breast cancer.  12490681
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE4268  125  44748  Breast and ovarian carcinoma  12960427
GSE2193  123  47017  Normal_human_tissues  15774023
GSE4335  122  46999  Norway/Stanford Breast Tumors  12829800
GSE3901  120  45982  Response of quiescent human fibroblasts to different growth...  
Other Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_SOX12
GSE2845  311  24479  Human breast tumor  
GSE2143  51  14443  Human coronary artery study  15942018
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE2052  26  9943  IPF versus Control  16128620
GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...  
RNA sequences according to Unigene available on : June 11 2008
EMBL BC028103.1; BC028103. [EMBL / GenBank / DDBJ]
BC067361.1; BC067361. [EMBL / GenBank / DDBJ]