Nice View of CleanEx : HS_SLC44A1

Nice View of CleanEx: HS_SLC44A1

This viewer shows only the top ten expression datasets of each type linked to HS_SLC44A1

To see the full entry, go to HS_SLC44A1 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_SLC44A1
Locus  9q31.2
Description of the gene  Solute carrier family 44, member 1.
Old gene names  "CDW92 antigen"
Cross-references
Entrez GeneID  23446
Genomic contig  AC_000052. Position of TSS : 78512263 on plus strand (based on ANNOTATION)
 AC_000141. Position of TSS : 77755880 on minus strand (based on ANNOTATION)
 NC_000009. Position of TSS : 107046749 on plus strand (based on ANNOTATION)
 NT_008470. Position of TSS : 15328133 on plus strand (based on ANNOTATION)
 NW_001839236. Position of TSS : 11732956 on minus strand (based on ANNOTATION)
 NW_924539. Position of TSS : 8221967 on plus strand (based on ANNOTATION)
Unigene  Hs.573495
MIM  606105
Genew  HGNC:18798; SLC44A1
GeneCards  SLC44A1
Ensembl  SLC44A1
RefSeq
 NM_080546 
SWISSPROT
 Q8WWI5(CTL1_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_SLC44A1
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...  
GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321
GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594
GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594
GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042
GSE3141  111  54675  Lung Cancer Dataset  16273092
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_SLC44A1
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_SLC44A1
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2741  164  28195  Breast Tumor's study  16230372
GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...  
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_SLC44A1
GSE2845  311  24479  Human breast tumor  
GSE2143  51  14443  Human coronary artery study  15942018
GSE4716B  50  5352  Gene expression-based, individualized outcome prediction for...  15064725
GSE2046  42  12426  Hep3B time-course  
GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...  
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...  
RNA sequences according to Unigene available on : June 11 2008
EMBL AJ272365.1; AJ272365. [EMBL / GenBank / DDBJ]
AJ420812.1; AJ420812. [EMBL / GenBank / DDBJ]
AK000109.1; AK000109. [EMBL / GenBank / DDBJ]
AK022549.1; AK022549. [EMBL / GenBank / DDBJ]
AK124926.1; AK124926. [EMBL / GenBank / DDBJ]
BC018213.1; BC018213. [EMBL / GenBank / DDBJ]
BC049203.1; BC049203. [EMBL / GenBank / DDBJ]