Nice View of CleanEx: HS_SLAMF9

General information about the entry

Entry name  HS_SLAMF9 Locus  1q23.2 Description of the gene  SLAM family member 9.

Cross-references

Entrez GeneID  89886 Genomic contig  AC_000044. Position of TSS : 132992445 on minus strand (based on ANNOTATION)  AC_000133. Position of TSS : 131277989 on plus strand (based on ANNOTATION)  NC_000001. Position of TSS : 158190633 on minus strand (based on ANNOTATION)  NT_004487. Position of TSS : 10414364 on minus strand (based on ANNOTATION)  NW_001838531. Position of TSS : 1485741 on plus strand (based on ANNOTATION)  NW_925683. Position of TSS : 10029271 on minus strand (based on ANNOTATION) Unigene  Hs.661712 MIM  608589 Genew  HGNC:18430; SLAMF9 GeneCards  SLAMF9 Ensembl  SLAMF9 RefSeq  NM_033438  SWISSPROT  Q96A28(SLAF9_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_SLAMF9 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...   GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012 GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629 GSE6606B  65  12553  Expression data from Primary Prostate Tumor  17430594 GSE6608B  59  12620  Expression data from Normal Prostate Tissue Adjacent to Tumor...  17430594

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_SLAMF9 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE2056  3  29318  PBECs stimulated with pro-inflammatory cytokines and P....  15701729

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_SLAMF9 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE4268  125  44748  Breast and ovarian carcinoma  12960427

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_SLAMF9 GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE1511  6  19282  Gene expression profile of CD56dimCD16+, CD56brightCD16- and...  15557145 GSE1510  5  34030  Human UniGene Set RZPD 1 - Zipf's Normalization

RNA sequences according to Unigene available on : June 11 2008

EMBL AF275725.1; AF275725. [EMBL / GenBank / DDBJ] AY034613.1; AY034613. [EMBL / GenBank / DDBJ] AY358801.1; AY358801. [EMBL / GenBank / DDBJ] BC070213.1; BC070213. [EMBL / GenBank / DDBJ] BC074754.2; BC074754. [EMBL / GenBank / DDBJ]