Nice View of CleanEx: HS_S100A16

General information about the entry

Entry name  HS_S100A16 Locus  1q21 Description of the gene  S100 calcium binding protein A16.

Cross-references

Entrez GeneID  140576 Genomic contig  AC_000044. Position of TSS : 126657037 on minus strand (based on ANNOTATION)  AC_000133. Position of TSS : 124948801 on minus strand (based on ANNOTATION)  NC_000001. Position of TSS : 151852137 on minus strand (based on ANNOTATION)  NT_004487. Position of TSS : 4075868 on minus strand (based on ANNOTATION)  NW_001838529. Position of TSS : 3766632 on minus strand (based on ANNOTATION)  NW_925683. Position of TSS : 3693863 on minus strand (based on ANNOTATION) Unigene  Hs.515714 Genew  HGNC:20441; S100A16 GeneCards  S100A16 Ensembl  S100A16 RefSeq  NM_080388  SWISSPROT  Q96FQ6(S10AG_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_S100A16 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_S100A16 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE41  4  36402  Effects of estrogen  11085516 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_S100A16 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE2003  64  9705  NCI cDNA microarray-human 60 cell lines  10700174

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_S100A16 GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...   GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1434  32  11519  HaCaT +GLI1/2 24/72h  16434164 GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE1433  12  9215  TIAR represses c-Myc biosynthesis following ultraviolet light...  16537914 GSE1361  9  9131  Concurrent Versus Individual Binding of HuR and AUF1 to Common...  15257295

RNA sequences according to Unigene available on : June 11 2008

EMBL AK290804.1; AK290804. [EMBL / GenBank / DDBJ] AY221961.1; AY221961. [EMBL / GenBank / DDBJ] AY762098.1; AY762098. [EMBL / GenBank / DDBJ] BC010541.1; BC010541. [EMBL / GenBank / DDBJ] BC019099.1; BC019099. [EMBL / GenBank / DDBJ] BC095462.1; BC095462. [EMBL / GenBank / DDBJ] U23859.1; U23859. [EMBL / GenBank / DDBJ] U92985.1; U92985. [EMBL / GenBank / DDBJ]