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Nice View of CleanEx : HS_RIPK1

Nice View of CleanEx: HS_RIPK1

This viewer shows only the top ten expression datasets of each type linked to HS_RIPK1

To see the full entry, go to HS_RIPK1 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_RIPK1
Locus  6p25.2
Description of the gene  Receptor (TNFRSF)-interacting serine-threonine kinase 1.
Cross-references
Entrez GeneID  8737
Genomic contig  AC_000049. Position of TSS : 4306074 on plus strand (based on ANNOTATION)
 AC_000138. Position of TSS : 2985831 on minus strand (based on ANNOTATION)
 NC_000006. Position of TSS : 3022056 on plus strand (based on ANNOTATION)
 NT_034880. Position of TSS : 3017056 on plus strand (based on ANNOTATION)
 NW_001838972. Position of TSS : 704945 on minus strand (based on ANNOTATION)
 NW_922984. Position of TSS : 2701330 on plus strand (based on ANNOTATION)
Unigene  Hs.519842
MIM  603453
Genew  HGNC:10019; RIPK1
GeneCards  RIPK1
Ensembl  RIPK1
RefSeq
 NM_003804 
SWISSPROT
 Q13546(RIPK1_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_RIPK1
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142
GSE1485  355  8793  Natural variation in human gene expression  15269782
GSE2350  336  12600  Normal and transformed human mature B cells  15778709
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_RIPK1
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_RIPK1
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2741  164  28195  Breast Tumor's study  16230372
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_RIPK1
GSE2845  311  24479  Human breast tumor  
GSE4882  125  665  A Gene Expression Signature to Predict Metastasis and Survival...  17202451
GSE2143  51  14443  Human coronary artery study  15942018
GSE2046  42  12426  Hep3B time-course  
GSE1434  32  11519  HaCaT +GLI1/2 24/72h  16434164
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE1748  22  858  VI-28 treatment induced alteration of gene expression in human...  
GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
RNA sequences according to Unigene available on : June 11 2008
EMBL AB208926.1; AB208926. [EMBL / GenBank / DDBJ]
AJ420482.1; AJ420482. [EMBL / GenBank / DDBJ]
AK096523.1; AK096523. [EMBL / GenBank / DDBJ]
AK304701.1; AK304701. [EMBL / GenBank / DDBJ]
BC126254.1; BC126254. [EMBL / GenBank / DDBJ]
BC126256.1; BC126256. [EMBL / GenBank / DDBJ]
U25994.1; U25994. [EMBL / GenBank / DDBJ]
U50062.1; U50062. [EMBL / GenBank / DDBJ]
Last update March 2014