Nice View of CleanEx : HS_PVRL1

Nice View of CleanEx: HS_PVRL1

This viewer shows only the top ten expression datasets of each type linked to HS_PVRL1

To see the full entry, go to HS_PVRL1 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



  

General information about the entry
Entry name  HS_PVRL1
Locus  11q23.3
Description of the gene  Poliovirus receptor-related 1 (herpesvirus entry mediator C).
Cross-references
Entrez GeneID  5818
Genomic contig  AC_000054. Position of TSS : 116760979 on minus strand (based on ANNOTATION)
 AC_000143. Position of TSS : 115451054 on plus strand (based on ANNOTATION)
 NC_000011. Position of TSS : 119104644 on minus strand (based on ANNOTATION)
 NT_033899. Position of TSS : 23161850 on minus strand (based on ANNOTATION)
 NW_001838042. Position of TSS : 1145596 on plus strand (based on ANNOTATION)
 NW_925173. Position of TSS : 29629879 on minus strand (based on ANNOTATION)
Unigene  Hs.334846
MIM  600644
Genew  HGNC:9706; PVRL1
GeneCards  PVRL1
Ensembl  PVRL1
RefSeq
 NM_002855   NM_203285   NM_203286 
SWISSPROT
 Q15223(PVRL1_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_PVRL1
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142
GSE1485  355  8793  Natural variation in human gene expression  15269782
GSE2350  336  12600  Normal and transformed human mature B cells  15778709
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_PVRL1
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_PVRL1
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2741  164  28195  Breast Tumor's study  16230372
GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...  
Other Expression Data References
Dataset's Name Number
of
Experiments 		Number
of
Features 		Dataset's Title PMID Features viewer
for
HS_PVRL1
GSE2845  311  24479  Human breast tumor  
GSE2143  51  14443  Human coronary artery study  15942018
GSE2046  42  12426  Hep3B time-course  
GSE1434  32  11519  HaCaT +GLI1/2 24/72h  16434164
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE2052  26  9943  IPF versus Control  16128620
GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596
RNA sequences according to Unigene available on : June 11 2008
EMBL AF060231.1; AF060231. [EMBL / GenBank / DDBJ]
AF110314.1; AF110314. [EMBL / GenBank / DDBJ]
AK056455.1; AK056455. [EMBL / GenBank / DDBJ]
AK091231.1; AK091231. [EMBL / GenBank / DDBJ]
AK095375.1; AK095375. [EMBL / GenBank / DDBJ]
AY029539.1; AY029539. [EMBL / GenBank / DDBJ]
BC007379.2; BC007379. [EMBL / GenBank / DDBJ]
BC021976.2; BC021976. [EMBL / GenBank / DDBJ]
BC044230.2; BC044230. [EMBL / GenBank / DDBJ]
BC064140.1; BC064140. [EMBL / GenBank / DDBJ]
BC086309.1; BC086309. [EMBL / GenBank / DDBJ]
BC104948.1; BC104948. [EMBL / GenBank / DDBJ]
BC113471.1; BC113471. [EMBL / GenBank / DDBJ]
X76400.2; X76400. [EMBL / GenBank / DDBJ]