| General information about the entry
|
|
| Entry name
|
HS_PTCHD2
|
| Locus
|
1p36.22
|
| Description of the gene
|
Patched domain containing 2.
|
|
|
| Entrez GeneID |
57540 |
| Genomic contig |
AC_000044. Position of TSS : 10651870 on plus strand (based on ANNOTATION)
AC_000133. Position of TSS : 10692606 on plus strand (based on ANNOTATION)
NC_000001. Position of TSS : 11461881 on plus strand (based on ANNOTATION)
NT_021937. Position of TSS : 6076661 on plus strand (based on ANNOTATION)
NW_001838534. Position of TSS : 509940 on plus strand (based on ANNOTATION)
NW_923572. Position of TSS : 8221196 on plus strand (based on ANNOTATION)
|
| Unigene |
Hs.202355 |
| MIM |
611251 |
| Genew |
HGNC:29251; PTCHD2 |
| GeneCards |
PTCHD2 |
| Ensembl |
PTCHD2 |
| RefSeq |
|
| SWISSPROT |
|
| EPD |
|
|
| Affymetrix Expression Data References
|
|
| Dataset's Name
|
Number
of
Experiments
|
Number
of
Features
|
Dataset's Title
|
PMID
|
Features viewer
for
HS_PTCHD2
|
| GSE2109
|
870
|
54675
|
Expression Project for Oncology (expO)
|
|
|
| GSE7307
|
677
|
54675
|
Human body index - transcriptional profiling
|
|
|
| GSE6532B
|
327
|
22645
|
Definition of clinically distinct molecular subtypes in...
|
17401012 |
|
| GSE4922B
|
289
|
22645
|
Genetic Reclassification of Histologic Grade Delineates New...
|
|
|
| GSE3494B
|
251
|
22645
|
An expression signature for p53 in breast cancer predicts...
|
16141321 |
|
| GSE1456B
|
159
|
22645
|
Gene expression of breast cancer tissue in a large...
|
16280042 |
|
| GSE3141
|
111
|
54675
|
Lung Cancer Dataset
|
16273092 |
|
| GSE1427B
|
99
|
22645
|
Expression profiles in Blast Bank samples with AML/RAEB
|
|
|
| GSE1145B
|
90
|
54675
|
changes in cardiac transcription profiles brought about by...
|
|
|
|
| COUNTS (SAGE or MPSS) Expression Data References
|
|
| Dataset's Name
|
Number
of
Experiments
|
Number
of
Features
|
Dataset's Title
|
PMID
|
Features viewer
for
HS_PTCHD2
|
| GSE14
|
210
|
603158
|
CGAP SAGE
|
11257097 |
|
| GSE1747
|
32
|
320452
|
Human 32 MPSS samples
|
|
|
| GSE1902
|
29
|
632194
|
Cancer Genome Anatomy Project (Human: longSAGE)
|
|
|
| HSEST
|
17
|
18349
|
Tissue break-down of ESTs derived from Unigene clusters
|
8849440 |
|
| GSE545
|
5
|
38903
|
SAGE Hiroshima gastric cancer tissue
|
15059891 |
|
| GSE10
|
4
|
96903
|
eye-SAGE
|
11756676 |
|
| GSE41
|
4
|
36402
|
Effects of estrogen
|
11085516 |
|
| GSE514
|
4
|
55481
|
AIDS-related Kaposi's sarcoma
|
12697073 |
|
| GSE507
|
3
|
7700
|
Novel estrogen and tamoxifen induced genes
|
11850811 |
|
|
| Dual Channel Expression Data References
|
|
| Dataset's Name
|
Number
of
Experiments
|
Number
of
Features
|
Dataset's Title
|
PMID
|
Features viewer
for
HS_PTCHD2
|
| R0002
|
295
|
24469
|
Survival in breast cancer.
|
12490681 |
|
| GSE1898
|
182
|
21533
|
Human Hepatocellular Carcinoma study
|
15565109 |
|
| GSE1726
|
167
|
14108
|
Rosetta_Merck_CEPH_Study
|
15514893 |
|
| GSE4382
|
167
|
47015
|
Repeated observation of breast tumor subtypes in independent...
|
12829800 |
|
| GSE4268
|
125
|
44748
|
Breast and ovarian carcinoma
|
12960427 |
|
| GSE2193
|
123
|
47017
|
Normal_human_tissues
|
15774023 |
|
| GSE4335
|
122
|
46999
|
Norway/Stanford Breast Tumors
|
12829800 |
|
| GSE3901
|
120
|
45982
|
Response of quiescent human fibroblasts to different growth...
|
|
|
| GSE425
|
119
|
43996
|
Acute myeloid leukemia study
|
15084693 |
|
|
| Other Expression Data References
|
|
| Dataset's Name
|
Number
of
Experiments
|
Number
of
Features
|
Dataset's Title
|
PMID
|
Features viewer
for
HS_PTCHD2
|
| GSE2845
|
311
|
24479
|
Human breast tumor
|
|
|
| GSE1767
|
31
|
19215
|
Human blood expression for Huntington's disease versus control,...
|
16043692 |
|
| GSE6752
|
31
|
18647
|
CodeLink Expression Data from primary prostate tumor and...
|
17430594 |
|
| GSE3155B
|
20
|
34671
|
Gene expression profiling of the 20 human early breast...
|
|
|
| GSE3155C
|
20
|
38993
|
Gene expression profiling of the 20 human early breast...
|
|
|
| GSE2075
|
14
|
23879
|
Rosetta_miRNA_transfection_experiment
|
15685193 |
|
| GSE2243
|
8
|
41419
|
RIZ1 repression is associated with insulin-like growth factor-1...
|
16953217 |
|
| GSE1511
|
6
|
19282
|
Gene expression profile of CD56dimCD16+, CD56brightCD16- and...
|
15557145 |
|
| GSE1133B
|
158
|
11391
|
tissue-specific pattern of mRNA expression
|
15075390 |
|
|
| RNA sequences according to Unigene available on : June 11 2008
|
|
|
|