Nice View of CleanEx : HS_PDXDC2

Nice View of CleanEx: HS_PDXDC2

This viewer shows only the top ten expression datasets of each type linked to HS_PDXDC2

To see the full entry, go to HS_PDXDC2 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_PDXDC2
Locus  16q22.1
Description of the gene  Pyridoxal-dependent decarboxylase domain containing 2.
Cross-references
Entrez GeneID  283970
Genomic contig  AC_000059. Position of TSS : 54615072 on minus strand (based on ANNOTATION)
 AC_000148. Position of TSS : 55961340 on minus strand (based on ANNOTATION)
 NC_000016. Position of TSS : 68657351 on minus strand (based on ANNOTATION)
 NT_010498. Position of TSS : 23714049 on minus strand (based on ANNOTATION)
 NW_001838291. Position of TSS : 102135 on minus strand (based on ANNOTATION)
 NW_926462. Position of TSS : 23679871 on minus strand (based on ANNOTATION)
Unigene  Hs.513695
Genew  HGNC:27559; PDXDC2
GeneCards  PDXDC2
Ensembl  PDXDC2
RefSeq
SWISSPROT
 Q6P474(PDXD2_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_PDXDC2
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...  
GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321
GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042
GSE3141  111  54675  Lung Cancer Dataset  16273092
GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB  
GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...  
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_PDXDC2
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073
GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_PDXDC2
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE1647  83  20112  Prediction of toxicant-specific gene expression signatures...  15598611
GSE763  75  20068  Cell-type specific responses to chemotherapeutics in breast...  15205334
GSE5828  59  19916  Gene expression profiling classifies lung squamous cell...  17601969
GSE5843  48  20115  Expression profiling defines a recurrence signature in lung...  17082175
GSE1486  36  21508  Steroids_Effect_on_HUVEC_Response_to_LPS_or_Cytokines  
GSE1039  27  21544  Differential Gene Expression by Memory T Helper Cells Bearing...  15236665
GSE1276  26  21472  Effect of cigarette smoke on normal human bronchial epithelial...  15326394
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_PDXDC2
GSE2046  42  12426  Hep3B time-course  
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
RNA sequences according to Unigene available on : June 11 2008
EMBL AK026209.1; AK026209. [EMBL / GenBank / DDBJ]
AK292860.1; AK292860. [EMBL / GenBank / DDBJ]
AL833251.1; AL833251. [EMBL / GenBank / DDBJ]
BC063633.1; BC063633. [EMBL / GenBank / DDBJ]
BX647358.1; BX647358. [EMBL / GenBank / DDBJ]