Nice View of CleanEx: HS_OTUD1

General information about the entry

Entry name  HS_OTUD1 Locus  10p12.2 Description of the gene  OTU domain containing 1.

Cross-references

Entrez GeneID  220213 Genomic contig  AC_000053. Position of TSS : 23416251 on plus strand (based on ANNOTATION)  AC_000142. Position of TSS : 23392024 on minus strand (based on ANNOTATION)  NC_000010. Position of TSS : 23767591 on plus strand (based on ANNOTATION)  NT_008705. Position of TSS : 5702910 on plus strand (based on ANNOTATION)  NW_001837931. Position of TSS : 7393571 on minus strand (based on ANNOTATION)  NW_924584. Position of TSS : 23416251 on plus strand (based on ANNOTATION) Unigene  Hs.499042 MIM  612022 Genew  HGNC:27346; OTUD1 GeneCards  OTUD1 Ensembl  OTUD1 RefSeq SWISSPROT  Q5VV17(OTUD1_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_OTUD1 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_OTUD1 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_OTUD1 R0002  295  24469  Survival in breast cancer.  12490681 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE4268  125  44748  Breast and ovarian carcinoma  12960427 GSE2193  123  47017  Normal_human_tissues  15774023 GSE4335  122  46999  Norway/Stanford Breast Tumors  12829800 GSE3901  120  45982  Response of quiescent human fibroblasts to different growth...   GSE425  119  43996  Acute myeloid leukemia study  15084693 GSE3933  112  45834  Prostate Cancer  14711987 GSE3281  100  9073  Breast Cancer aCGH  12297621

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_OTUD1 GSE2845  311  24479  Human breast tumor   GSE2143  51  14443  Human coronary artery study  15942018 GSE4716B  50  5352  Gene expression-based, individualized outcome prediction for...  15064725 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193

RNA sequences according to Unigene available on : June 11 2008

EMBL AB188491.1; AB188491. [EMBL / GenBank / DDBJ] AK096389.1; AK096389. [EMBL / GenBank / DDBJ]