Nice View of CleanEx: HS_NLRP9

General information about the entry

Entry name  HS_NLRP9 Locus  19q13.42 Description of the gene  NLR family, pyrin domain containing 9. Old gene names  "NACHT, leucine rich repeat and PYD containing 9"

Cross-references

Entrez GeneID  338321 Genomic contig  AC_000062. Position of TSS : 53294501 on minus strand (based on ANNOTATION)  AC_000151. Position of TSS : 52530876 on plus strand (based on ANNOTATION)  NC_000019. Position of TSS : 60941579 on minus strand (based on ANNOTATION)  NT_011109. Position of TSS : 28517957 on minus strand (based on ANNOTATION)  NW_001838501. Position of TSS : 2856490 on plus strand (based on ANNOTATION)  NW_927284. Position of TSS : 5601785 on minus strand (based on ANNOTATION) Unigene  Hs.661568 MIM  609663 Genew  HGNC:22941; NLRP9 GeneCards  NLRP9 Ensembl  NLRP9 RefSeq  NM_176820  SWISSPROT  Q7RTR0(NALP9_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NLRP9 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...   GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012 GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629 GSE3744  47  54675  Human breast tumor expression  16473279 GSE2125  45  54675  isolated alveolar macrophages  16166618 GSE1643  40  54675  Normal Variance of Gene Expression in the Human Lung  16498083

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NLRP9 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE10  4  96903  eye-SAGE  11756676 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2056  3  29318  PBECs stimulated with pro-inflammatory cytokines and P....  15701729 GSE17  2  21113  Young and old muscle comparison  10904065 GSE2346  1  42399  The pattern of gene expression in human CD34(+) stem/progenitor...  11717454

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NLRP9 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE60  133  18613  Diffuse large B-cell lymphoma  10676951 GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE3211  102  20177  Relation of Gene Expression Phenotype to Immunoglobulin...  11733578

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NLRP9 GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...

RNA sequences according to Unigene available on : June 11 2008

EMBL AY154464.1; AY154464. [EMBL / GenBank / DDBJ] BC136583.1; BC136583. [EMBL / GenBank / DDBJ]