Nice View of CleanEx: HS_NAIF1

General information about the entry

Entry name  HS_NAIF1 Locus  9q34.11 Description of the gene  Nuclear apoptosis inducing factor 1. Old gene names  "chromosome 9 open reading frame 90"

Cross-references

Entrez GeneID  203245 Genomic contig  AC_000052. Position of TSS : 101481412 on minus strand (based on ANNOTATION)  AC_000141. Position of TSS : 100444619 on minus strand (based on ANNOTATION)  NC_000009. Position of TSS : 129869211 on minus strand (based on ANNOTATION)  NT_008470. Position of TSS : 38150595 on minus strand (based on ANNOTATION)  NW_001839239. Position of TSS : 6171927 on minus strand (based on ANNOTATION)  NW_924573. Position of TSS : 14969243 on minus strand (based on ANNOTATION) Unigene  Hs.373606 MIM  610673 Genew  HGNC:25446; NAIF1 GeneCards  NAIF1 Ensembl  NAIF1 RefSeq  NM_197956  SWISSPROT  Q69YI7(NAIF1_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NAIF1 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NAIF1 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NAIF1 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE4268  125  44748  Breast and ovarian carcinoma  12960427

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_NAIF1 GSE2845  311  24479  Human breast tumor   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193 GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217 GSE1510  5  34030  Human UniGene Set RZPD 1 - Zipf's Normalization

RNA sequences according to Unigene available on : June 11 2008

EMBL AK122729.1; AK122729. [EMBL / GenBank / DDBJ] BC013371.2; BC013371. [EMBL / GenBank / DDBJ] BC021580.1; BC021580. [EMBL / GenBank / DDBJ] BC047160.1; BC047160. [EMBL / GenBank / DDBJ]