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Nice View of CleanEx : HS_MUC16

Nice View of CleanEx: HS_MUC16

This viewer shows only the top ten expression datasets of each type linked to HS_MUC16

To see the full entry, go to HS_MUC16 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_MUC16
Locus  19p13.2
Description of the gene  Mucin 16, cell surface associated.
Cross-references
Entrez GeneID  94025
Genomic contig  AC_000062. Position of TSS : 8989158 on minus strand (based on ANNOTATION)
 AC_000151. Position of TSS : 8536941 on plus strand (based on ANNOTATION)
 NC_000019. Position of TSS : 8953017 on minus strand (based on ANNOTATION)
 NT_011295. Position of TSS : 354819 on minus strand (based on ANNOTATION)
 NW_001838482. Position of TSS : 178 on plus strand (based on ANNOTATION)
 NW_927195. Position of TSS : 205404 on minus strand (based on ANNOTATION)
Unigene  Hs.432676
MIM  606154
Genew  HGNC:15582; MUC16
GeneCards  MUC16
Ensembl  MUC16
RefSeq
 NM_024690 
SWISSPROT
 Q8WXI7(MUC16_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_MUC16
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
GSE2034  286  22283  Breast cancer relapse free survival  15721472
GSE3494A  251  22283  An expression signature for p53 in breast cancer predicts...  16141321
GSE7390  198  22283  Strong Time Dependence of the 76-Gene Prognostic Signature  17545524
GSE2990  189  22283  Gene Expression Profiling in Breast Cancer: Understanding the...  16478745
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_MUC16
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073
GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791
GSE507  3  7700  Novel estrogen and tamoxifen induced genes  11850811
GSE2017  2  13386  Genomic alterations in primary hyperaldosteronism  16204365
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_MUC16
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE2741  164  28195  Breast Tumor's study  16230372
GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...  
GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_MUC16
GSE2845  311  24479  Human breast tumor  
GSE2143  51  14443  Human coronary artery study  15942018
GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...  
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193
GSE1511  6  19282  Gene expression profile of CD56dimCD16+, CD56brightCD16- and...  15557145
RNA sequences according to Unigene available on : June 11 2008
EMBL AF361486.3; AF361486. [EMBL / GenBank / DDBJ]
AF414442.2; AF414442. [EMBL / GenBank / DDBJ]
AK024365.1; AK024365. [EMBL / GenBank / DDBJ]
AK056791.1; AK056791. [EMBL / GenBank / DDBJ]
AK128856.1; AK128856. [EMBL / GenBank / DDBJ]
AK128857.1; AK128857. [EMBL / GenBank / DDBJ]
Last update March 2014