Nice View of CleanEx: HS_KRTAP3-2

General information about the entry

Entry name  HS_KRTAP3-2 Locus  17q12-q21 Description of the gene  Keratin associated protein 3-2.

Cross-references

Entrez GeneID  83897 Genomic contig  AC_000060. Position of TSS : 35817741 on minus strand (based on ANNOTATION)  AC_000149. Position of TSS : 34950467 on plus strand (based on ANNOTATION)  NC_000017. Position of TSS : 36409663 on minus strand (based on ANNOTATION)  NT_010755. Position of TSS : 2880433 on minus strand (based on ANNOTATION)  NW_001838435. Position of TSS : 601698 on plus strand (based on ANNOTATION)  NW_926828. Position of TSS : 2688932 on minus strand (based on ANNOTATION) Unigene  Hs.307026 Genew  HGNC:16779; KRTAP3-2 GeneCards  KRTAP3-2 Ensembl  KRTAP3-2 RefSeq  NM_031959  SWISSPROT  Q9BYR7(KRA32_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KRTAP3-2 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB   GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KRTAP3-2 GSE14  210  603158  CGAP SAGE  11257097 GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE508  2  30803  Targets of c-Jun NH(2)-terminal kinase 2-mediated tumor growth...  12036942 GSE2346  1  42399  The pattern of gene expression in human CD34(+) stem/progenitor...  11717454

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KRTAP3-2 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE1378  60  21899  breast cancer / tamoxifen monotherapy (microdissected tumor...  15193263

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KRTAP3-2 GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE1511  6  19282  Gene expression profile of CD56dimCD16+, CD56brightCD16- and...  15557145 GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AJ406932.1; AJ406932. [EMBL / GenBank / DDBJ] BC034582.1; BC034582. [EMBL / GenBank / DDBJ]