Nice View of CleanEx: HS_KIAA1407

General information about the entry

Entry name  HS_KIAA1407 Locus  3q13.31 Description of the gene  KIAA1407.

Cross-references

Entrez GeneID  57577 Genomic contig  AC_000046. Position of TSS : 112183886 on minus strand (based on ANNOTATION)  AC_000135. Position of TSS : 111057030 on plus strand (based on ANNOTATION)  NC_000003. Position of TSS : 115258149 on minus strand (based on ANNOTATION)  NT_005612. Position of TSS : 20270605 on minus strand (based on ANNOTATION)  NW_001838881. Position of TSS : 6520593 on plus strand (based on ANNOTATION)  NW_921807. Position of TSS : 20369556 on minus strand (based on ANNOTATION) Unigene  Hs.477159 Genew  HGNC:29272; KIAA1407 GeneCards  KIAA1407 Ensembl  KIAA1407 RefSeq  NM_020817  SWISSPROT  Q8NCU4(K1407_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KIAA1407 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KIAA1407 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KIAA1407 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KIAA1407 GSE2845  311  24479  Human breast tumor   GSE2143  51  14443  Human coronary artery study  15942018 GSE4716A  50  5352  Gene expression-based, individualized outcome prediction for...  15064725 GSE2046  42  12426  Hep3B time-course   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE1836  20  5351  Comparison of native versus cultured RPE cells  16234463 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...

RNA sequences according to Unigene available on : June 11 2008

EMBL AB037828.1; AB037828. [EMBL / GenBank / DDBJ] AF509494.1; AF509494. [EMBL / GenBank / DDBJ] AK125304.1; AK125304. [EMBL / GenBank / DDBJ] AK295855.1; AK295855. [EMBL / GenBank / DDBJ] AK302488.1; AK302488. [EMBL / GenBank / DDBJ]