Nice View of CleanEx: HS_KANK4

General information about the entry

Entry name  HS_KANK4 Locus  1p31.3 Description of the gene  KN motif and ankyrin repeat domains 4. Old gene names  "ankyrin repeat domain 38"

Cross-references

Entrez GeneID  163782 Genomic contig  AC_000044. Position of TSS : 61074104 on minus strand (based on ANNOTATION)  AC_000133. Position of TSS : 60814486 on plus strand (based on ANNOTATION)  NC_000001. Position of TSS : 62557670 on minus strand (based on ANNOTATION)  NT_032977. Position of TSS : 32757001 on minus strand (based on ANNOTATION)  NW_001838579. Position of TSS : 20897056 on plus strand (based on ANNOTATION)  NW_921351. Position of TSS : 36934962 on minus strand (based on ANNOTATION) Unigene  Hs.283398 Genew  HGNC:27263; KANK4 GeneCards  KANK4 Ensembl  KANK4 RefSeq  NM_181712  SWISSPROT  Q5T7N3(KANK4_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KANK4 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KANK4 GSE14  210  603158  CGAP SAGE  11257097 GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE508  2  30803  Targets of c-Jun NH(2)-terminal kinase 2-mediated tumor growth...  12036942 GSE608  2  31851  Human embryonic stem cells  14688391

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KANK4 R0002  295  24469  Survival in breast cancer.  12490681 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE4268  125  44748  Breast and ovarian carcinoma  12960427 GSE2193  123  47017  Normal_human_tissues  15774023 GSE4335  122  46999  Norway/Stanford Breast Tumors  12829800 GSE3901  120  45982  Response of quiescent human fibroblasts to different growth...   GSE425  119  43996  Acute myeloid leukemia study  15084693 GSE3933  112  45834  Prostate Cancer  14711987

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_KANK4 GSE2845  311  24479  Human breast tumor   GSE4716A  50  5352  Gene expression-based, individualized outcome prediction for...  15064725 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE1836  20  5351  Comparison of native versus cultured RPE cells  16234463 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193

RNA sequences according to Unigene available on : June 11 2008

EMBL AB284127.1; AB284127. [EMBL / GenBank / DDBJ] AK091941.1; AK091941. [EMBL / GenBank / DDBJ] AK096259.1; AK096259. [EMBL / GenBank / DDBJ] AK127461.1; AK127461. [EMBL / GenBank / DDBJ] AL832644.2; AL832644. [EMBL / GenBank / DDBJ] BC041418.1; BC041418. [EMBL / GenBank / DDBJ] BC060866.1; BC060866. [EMBL / GenBank / DDBJ]