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Nice View of CleanEx : HS_JPH2

Nice View of CleanEx: HS_JPH2

This viewer shows only the top ten expression datasets of each type linked to HS_JPH2

To see the full entry, go to HS_JPH2 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_JPH2
Locus  20q13.12
Description of the gene  Junctophilin 2.
Cross-references
Entrez GeneID  57158
Genomic contig  AC_000063. Position of TSS : 39524816 on minus strand (based on ANNOTATION)
 AC_000152. Position of TSS : 39552741 on minus strand (based on ANNOTATION)
 NC_000020. Position of TSS : 42249631 on minus strand (based on ANNOTATION)
 NT_011362. Position of TSS : 7869132 on minus strand (based on ANNOTATION)
 NW_001838666. Position of TSS : 5873590 on minus strand (based on ANNOTATION)
 NW_927339. Position of TSS : 13027925 on minus strand (based on ANNOTATION)
Unigene  Hs.441737
MIM  605267
Genew  HGNC:14202; JPH2
GeneCards  JPH2
Ensembl  JPH2
RefSeq
 NM_020433   NM_175913 
SWISSPROT
 Q9BR39(JPH2_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_JPH2
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...  
GSE2034  286  22283  Breast cancer relapse free survival  15721472
GSE3494A  251  22283  An expression signature for p53 in breast cancer predicts...  16141321
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_JPH2
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE10  4  96903  eye-SAGE  11756676
GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073
GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_JPH2
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2741  164  28195  Breast Tumor's study  16230372
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_JPH2
GSE2845  311  24479  Human breast tumor  
GSE2143  51  14443  Human coronary artery study  15942018
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE2052  26  9943  IPF versus Control  16128620
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...  
GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193
GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217
RNA sequences according to Unigene available on : June 11 2008
EMBL AK098288.1; AK098288. [EMBL / GenBank / DDBJ]
AK098303.1; AK098303. [EMBL / GenBank / DDBJ]
AK304863.1; AK304863. [EMBL / GenBank / DDBJ]
AL132999.1; AL132999. [EMBL / GenBank / DDBJ]
BC043206.2; BC043206. [EMBL / GenBank / DDBJ]
Last update March 2014