Nice View of CleanEx: HS_GCNT2

General information about the entry

Entry name  HS_GCNT2 Locus  6p24.2 Description of the gene  Glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group). Old gene names  "glucosaminyl (N-acetyl) transferase 5", "glucosaminyl (N-acetyl) transferase 2, I-branching enzyme", "glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Ii blood group)", "cataract, congenital"

Cross-references

Entrez GeneID  2651 Genomic contig  AC_000049. Position of TSS : 11757214 on plus strand (based on ANNOTATION)  AC_000138. Position of TSS : 10404436 on plus strand (based on ANNOTATION)  NC_000006. Position of TSS : 10636696 on plus strand (based on ANNOTATION)  NG_007469. Position of TSS : 5000 on plus strand (based on ANNOTATION)  NT_007592. Position of TSS : 1386968 on plus strand (based on ANNOTATION)  NW_001838973. Position of TSS : 6749473 on plus strand (based on ANNOTATION)  NW_922984. Position of TSS : 10152470 on plus strand (based on ANNOTATION) Unigene  Hs.519884 MIM  600429 Genew  HGNC:4204; GCNT2 GeneCards  GCNT2 Ensembl  GCNT2 RefSeq  NM_001491   NM_145649   NM_145655  SWISSPROT  Q06430(GCNT2_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GCNT2 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142 GSE1485  355  8793  Natural variation in human gene expression  15269782 GSE2350  336  12600  Normal and transformed human mature B cells  15778709 GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012 GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694 GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GCNT2 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GCNT2 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GCNT2 GSE2845  311  24479  Human breast tumor   GSE137  70  10368  Natural variation in human gene expression assessed in...  12567189 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1434  32  11519  HaCaT +GLI1/2 24/72h  16434164 GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE2052  26  9943  IPF versus Control  16128620 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...

RNA sequences according to Unigene available on : June 11 2008

EMBL AB078432.1; AB078432. [EMBL / GenBank / DDBJ] AB078433.1; AB078433. [EMBL / GenBank / DDBJ] AF401652.1; AF401652. [EMBL / GenBank / DDBJ] AF401653.1; AF401653. [EMBL / GenBank / DDBJ] AF458024.1; AF458024. [EMBL / GenBank / DDBJ] AF458025.1; AF458025. [EMBL / GenBank / DDBJ] AF458026.1; AF458026. [EMBL / GenBank / DDBJ] AF458027.1; AF458027. [EMBL / GenBank / DDBJ] AF458028.1; AF458028. [EMBL / GenBank / DDBJ] AF458029.1; AF458029. [EMBL / GenBank / DDBJ] AF458030.1; AF458030. [EMBL / GenBank / DDBJ] AK090483.1; AK090483. [EMBL / GenBank / DDBJ] AK098105.1; AK098105. [EMBL / GenBank / DDBJ] AK291195.1; AK291195. [EMBL / GenBank / DDBJ] AK291767.1; AK291767. [EMBL / GenBank / DDBJ] AL832714.1; AL832714. [EMBL / GenBank / DDBJ] AL832719.1; AL832719. [EMBL / GenBank / DDBJ] AY435145.1; AY435145. [EMBL / GenBank / DDBJ] AY435146.1; AY435146. [EMBL / GenBank / DDBJ] AY435147.1; AY435147. [EMBL / GenBank / DDBJ] BC074801.2; BC074801. [EMBL / GenBank / DDBJ] BC074802.2; BC074802. [EMBL / GenBank / DDBJ] BC130524.1; BC130524. [EMBL / GenBank / DDBJ] BX647668.1; BX647668. [EMBL / GenBank / DDBJ] L19659.1; L19659. [EMBL / GenBank / DDBJ] Z19550.1; Z19550. [EMBL / GenBank / DDBJ]