Nice View of CleanEx: HS_GATA5

General information about the entry

Entry name  HS_GATA5 Locus  20q13.33 Description of the gene  GATA binding protein 5. Old gene names  "GATA-binding protein 5"

Cross-references

Entrez GeneID  140628 Genomic contig  AC_000063. Position of TSS : 57786308 on minus strand (based on ANNOTATION)  AC_000152. Position of TSS : 57816177 on plus strand (based on ANNOTATION)  NC_000020. Position of TSS : 60484420 on minus strand (based on ANNOTATION)  NT_011362. Position of TSS : 26103921 on minus strand (based on ANNOTATION)  NW_001838669. Position of TSS : 27745 on plus strand (based on ANNOTATION)  NW_927339. Position of TSS : 31289417 on minus strand (based on ANNOTATION) Unigene  Hs.352250 MIM  611496 Genew  HGNC:15802; GATA5 GeneCards  GATA5 Ensembl  GATA5 RefSeq  NM_080473  SWISSPROT  Q9BWX5(GATA5_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GATA5 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GATA5 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE278  3  14807  Pancreas and islet gene expression   GSE17  2  21113  Young and old muscle comparison  10904065

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GATA5 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE4268  125  44748  Breast and ovarian carcinoma  12960427

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GATA5 GSE2845  311  24479  Human breast tumor   GSE2143  51  14443  Human coronary artery study  15942018 GSE4716B  50  5352  Gene expression-based, individualized outcome prediction for...  15064725 GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217 GSE1510  5  34030  Human UniGene Set RZPD 1 - Zipf's Normalization

RNA sequences according to Unigene available on : June 11 2008

EMBL BC047790.1; BC047790. [EMBL / GenBank / DDBJ] BC117356.1; BC117356. [EMBL / GenBank / DDBJ] BC117358.1; BC117358. [EMBL / GenBank / DDBJ]