Nice View of CleanEx: HS_GAL3ST3

General information about the entry

Entry name  HS_GAL3ST3 Locus  11q13.1 Description of the gene  Galactose-3-O-sulfotransferase 3.

Cross-references

Entrez GeneID  89792 Genomic contig  AC_000054. Position of TSS : 63141352 on minus strand (based on ANNOTATION)  AC_000143. Position of TSS : 62134133 on plus strand (based on ANNOTATION)  NC_000011. Position of TSS : 65573226 on minus strand (based on ANNOTATION)  NT_033903. Position of TSS : 11122445 on minus strand (based on ANNOTATION)  NW_001838025. Position of TSS : 3260336 on plus strand (based on ANNOTATION)  NW_925106. Position of TSS : 11489428 on minus strand (based on ANNOTATION) Unigene  Hs.208343 MIM  608234 Genew  HGNC:24144; GAL3ST3 GeneCards  GAL3ST3 Ensembl  GAL3ST3 RefSeq  NM_033036  SWISSPROT  Q96A11(G3ST3_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GAL3ST3 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...   GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012 GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629 GSE6606B  65  12553  Expression data from Primary Prostate Tumor  17430594 GSE6608B  59  12620  Expression data from Normal Prostate Tissue Adjacent to Tumor...  17430594

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GAL3ST3 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2056  3  29318  PBECs stimulated with pro-inflammatory cytokines and P....  15701729

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GAL3ST3 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_GAL3ST3 GSE2845  311  24479  Human breast tumor   GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193 GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217

RNA sequences according to Unigene available on : June 11 2008

EMBL AB053232.1; AB053232. [EMBL / GenBank / DDBJ] AY026481.1; AY026481. [EMBL / GenBank / DDBJ] BC113552.1; BC113552. [EMBL / GenBank / DDBJ] BC113554.1; BC113554. [EMBL / GenBank / DDBJ]