Nice View of CleanEx: HS_FMR1NB

General information about the entry

Entry name  HS_FMR1NB Locus  Xq27.3-q28 Description of the gene  Fragile X mental retardation 1 neighbor.

Cross-references

Entrez GeneID  158521 Genomic contig  AC_000066. Position of TSS : 147414812 on plus strand (based on ANNOTATION)  AC_000155. Position of TSS : 136069558 on minus strand (based on ANNOTATION)  NC_000023. Position of TSS : 146870540 on plus strand (based on ANNOTATION)  NT_011681. Position of TSS : 3505530 on plus strand (based on ANNOTATION)  NW_001842411. Position of TSS : 191060 on minus strand (based on ANNOTATION)  NW_927727. Position of TSS : 1162875 on plus strand (based on ANNOTATION) Unigene  Hs.128580 Genew  HGNC:26372; FMR1NB GeneCards  FMR1NB Ensembl  FMR1NB RefSeq  NM_152578  SWISSPROT  Q8N0W7(FMR1N_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_FMR1NB GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...   GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012 GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629 GSE6606C  64  12646  Expression data from Primary Prostate Tumor  17430594 GSE6608C  57  12646  Expression data from Normal Prostate Tissue Adjacent to Tumor...  17430594

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_FMR1NB GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_FMR1NB GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE4268  125  44748  Breast and ovarian carcinoma  12960427 GSE2193  123  47017  Normal_human_tissues  15774023

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_FMR1NB GSE137  70  10368  Natural variation in human gene expression assessed in...  12567189 GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217

RNA sequences according to Unigene available on : June 11 2008

EMBL AK098602.1; AK098602. [EMBL / GenBank / DDBJ] AY211917.1; AY211917. [EMBL / GenBank / DDBJ] BC034320.1; BC034320. [EMBL / GenBank / DDBJ]