Nice View of CleanEx : HS_FAM163A

Nice View of CleanEx: HS_FAM163A

This viewer shows only the top ten expression datasets of each type linked to HS_FAM163A

To see the full entry, go to HS_FAM163A full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_FAM163A
Locus  1q25.2
Description of the gene  Family with sequence similarity 163, member A.
Old gene names  "chromosome 1 open reading frame 76"
Cross-references
Entrez GeneID  148753
Genomic contig  AC_000044. Position of TSS : 152819915 on plus strand (based on ANNOTATION)
 AC_000133. Position of TSS : 151017319 on minus strand (based on ANNOTATION)
 NC_000001. Position of TSS : 177978920 on plus strand (based on ANNOTATION)
 NT_004487. Position of TSS : 30202651 on plus strand (based on ANNOTATION)
 NW_001838533. Position of TSS : 26161195 on minus strand (based on ANNOTATION)
 NW_926128. Position of TSS : 18074674 on plus strand (based on ANNOTATION)
Unigene  Hs.400696
MIM  611727
Genew  HGNC:28274; FAM163A
GeneCards  FAM163A
Ensembl  FAM163A
RefSeq
 NM_173509 
SWISSPROT
 Q96GL9(F163A_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_FAM163A
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...  
GSE2034  286  22283  Breast cancer relapse free survival  15721472
GSE3494A  251  22283  An expression signature for p53 in breast cancer predicts...  16141321
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_FAM163A
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073
GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_FAM163A
R0002  295  24469  Survival in breast cancer.  12490681
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2283B  136  5204  Primary human neuroblastoma  15837623
GSE4268  125  44748  Breast and ovarian carcinoma  12960427
GSE2193  123  47017  Normal_human_tissues  15774023
GSE4335  122  46999  Norway/Stanford Breast Tumors  12829800
GSE3901  120  45982  Response of quiescent human fibroblasts to different growth...  
GSE425  119  43996  Acute myeloid leukemia study  15084693
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_FAM163A
GSE2845  311  24479  Human breast tumor  
GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...  
GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...  
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...  
GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193
GSE1433  12  9215  TIAR represses c-Myc biosynthesis following ultraviolet light...  16537914
RNA sequences according to Unigene available on : June 11 2008
EMBL AB299025.1; AB299025. [EMBL / GenBank / DDBJ]
AK292432.1; AK292432. [EMBL / GenBank / DDBJ]
AK302665.1; AK302665. [EMBL / GenBank / DDBJ]
AY902195.1; AY902195. [EMBL / GenBank / DDBJ]
BC009382.2; BC009382. [EMBL / GenBank / DDBJ]
BC033359.1; BC033359. [EMBL / GenBank / DDBJ]