Nice View of CleanEx: HS_CLEC4D

General information about the entry

Entry name  HS_CLEC4D Locus  12p13.31 Description of the gene  C-type lectin domain family 4, member D. Old gene names  "C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 8"

Cross-references

Entrez GeneID  338339 Genomic contig  AC_000055. Position of TSS : 10202131 on plus strand (based on ANNOTATION)  AC_000144. Position of TSS : 8448484 on plus strand (based on ANNOTATION)  NC_000012. Position of TSS : 8557402 on plus strand (based on ANNOTATION)  NT_009714. Position of TSS : 1425109 on plus strand (based on ANNOTATION)  NW_001838051. Position of TSS : 1397593 on plus strand (based on ANNOTATION)  NW_925295. Position of TSS : 8405713 on plus strand (based on ANNOTATION) Unigene  Hs.351811 MIM  609964 Genew  HGNC:14554; CLEC4D GeneCards  CLEC4D Ensembl  CLEC4D RefSeq  NM_080387  SWISSPROT  Q8WXI8(CLC4D_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CLEC4D GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...   GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012 GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629 GSE3744  47  54675  Human breast tumor expression  16473279 GSE2125  45  54675  isolated alveolar macrophages  16166618 GSE1643  40  54675  Normal Variance of Gene Expression in the Human Lung  16498083

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CLEC4D GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2346  1  42399  The pattern of gene expression in human CD34(+) stem/progenitor...  11717454

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CLEC4D GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE2179  98  7823  Expression profiling of secreted and cell surface genes of 5...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CLEC4D GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AF411850.1; AF411850. [EMBL / GenBank / DDBJ] AY115592.1; AY115592. [EMBL / GenBank / DDBJ] AY297446.1; AY297446. [EMBL / GenBank / DDBJ] AY486482.1; AY486482. [EMBL / GenBank / DDBJ] AY486483.1; AY486483. [EMBL / GenBank / DDBJ] BC032313.1; BC032313. [EMBL / GenBank / DDBJ]