Nice View of CleanEx: HS_CDK10

General information about the entry

Entry name  HS_CDK10 Locus  16q24 Description of the gene  Cyclin-dependent kinase 10. Old gene names  "cyclin-dependent kinase (CDC2-like) 10"

Cross-references

Entrez GeneID  8558 Genomic contig  AC_000059. Position of TSS : 74817510 on plus strand (based on ANNOTATION)  AC_000148. Position of TSS : 75458036 on minus strand (based on ANNOTATION)  NC_000016. Position of TSS : 88280576 on plus strand (based on ANNOTATION)  NT_010542. Position of TSS : 1313692 on plus strand (based on ANNOTATION)  NW_001838336. Position of TSS : 418231 on minus strand (based on ANNOTATION)  NW_926561. Position of TSS : 1385500 on plus strand (based on ANNOTATION) Unigene  Hs.699177 MIM  603464 Genew  HGNC:1770; CDK10 GeneCards  CDK10 Ensembl  CDK10 RefSeq  NM_001098533   NM_052987   NM_052988  SWISSPROT  Q15131(CDK10_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CDK10 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142 GSE1485  355  8793  Natural variation in human gene expression  15269782 GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012 GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694 GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...   GSE2034  286  22283  Breast cancer relapse free survival  15721472 GSE3494A  251  22283  An expression signature for p53 in breast cancer predicts...  16141321

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CDK10 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CDK10 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE60  133  18613  Diffuse large B-cell lymphoma  10676951 GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE3211  102  20177  Relation of Gene Expression Phenotype to Immunoglobulin...  11733578

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CDK10 GSE2143  51  14443  Human coronary artery study  15942018 GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE2053  8  15075  RAvs.ND   GSE1510  5  34030  Human UniGene Set RZPD 1 - Zipf's Normalization

RNA sequences according to Unigene available on : June 11 2008

EMBL AK131531.1; AK131531. [EMBL / GenBank / DDBJ] AK290485.1; AK290485. [EMBL / GenBank / DDBJ] AK292351.1; AK292351. [EMBL / GenBank / DDBJ] BC017342.2; BC017342. [EMBL / GenBank / DDBJ] BC025301.1; BC025301. [EMBL / GenBank / DDBJ] BC093028.1; BC093028. [EMBL / GenBank / DDBJ] L33264.1; L33264. [EMBL / GenBank / DDBJ]