Nice View of CleanEx: HS_CATSPER1

General information about the entry

Entry name  HS_CATSPER1 Locus  11q12.1 Description of the gene  Cation channel, sperm associated 1.

Cross-references

Entrez GeneID  117144 Genomic contig  AC_000054. Position of TSS : 63118340 on minus strand (based on ANNOTATION)  AC_000143. Position of TSS : 62110292 on plus strand (based on ANNOTATION)  NC_000011. Position of TSS : 65550559 on minus strand (based on ANNOTATION)  NT_033903. Position of TSS : 11099778 on minus strand (based on ANNOTATION)  NW_001838025. Position of TSS : 3282832 on plus strand (based on ANNOTATION)  NW_925106. Position of TSS : 11466416 on minus strand (based on ANNOTATION) Unigene  Hs.189105 MIM  606389 Genew  HGNC:17116; CATSPER1 GeneCards  CATSPER1 Ensembl  CATSPER1 RefSeq  NM_053054  SWISSPROT  Q8NEC5(CTSR1_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CATSPER1 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...   GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012 GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629 GSE3744  47  54675  Human breast tumor expression  16473279 GSE2125  45  54675  isolated alveolar macrophages  16166618 GSE1643  40  54675  Normal Variance of Gene Expression in the Human Lung  16498083

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CATSPER1 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE10  4  96903  eye-SAGE  11756676 GSE2056  3  29318  PBECs stimulated with pro-inflammatory cytokines and P....  15701729

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CATSPER1 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE2179  98  7823  Expression profiling of secreted and cell surface genes of 5...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_CATSPER1 GSE4056  190  2895  Expression profiling of human primary breast cancer tissue...  16622258 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AF407333.1; AF407333. [EMBL / GenBank / DDBJ] BC032950.2; BC032950. [EMBL / GenBank / DDBJ] BC036522.2; BC036522. [EMBL / GenBank / DDBJ]