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Nice View of CleanEx : HS_CALR3

Nice View of CleanEx: HS_CALR3

This viewer shows only the top ten expression datasets of each type linked to HS_CALR3

To see the full entry, go to HS_CALR3 full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_CALR3
Locus  19p13.11
Description of the gene  Calreticulin 3.
Cross-references
Entrez GeneID  125972
Genomic contig  AC_000062. Position of TSS : 16508839 on minus strand (based on ANNOTATION)
 AC_000151. Position of TSS : 16175503 on minus strand (based on ANNOTATION)
 NC_000019. Position of TSS : 16468002 on minus strand (based on ANNOTATION)
 NT_011295. Position of TSS : 7869804 on minus strand (based on ANNOTATION)
 NW_001838484. Position of TSS : 1899883 on minus strand (based on ANNOTATION)
 NW_927195. Position of TSS : 7725085 on minus strand (based on ANNOTATION)
Unigene  Hs.304020
MIM  611414
Genew  HGNC:20407; CALR3
GeneCards  CALR3
Ensembl  CALR3
RefSeq
 NM_145046 
SWISSPROT
 Q96L12(CALR3_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_CALR3
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE3141  111  54675  Lung Cancer Dataset  16273092
GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...  
GSE6532C  87  54675  Definition of clinically distinct molecular subtypes in...  17401012
GSE9195  77  54675  Predicting prognosis using molecular profiling in estrogen...  18498629
GSE3744  47  54675  Human breast tumor expression  16473279
GSE2125  45  54675  isolated alveolar macrophages  16166618
GSE1643  40  54675  Normal Variance of Gene Expression in the Human Lung  16498083
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_CALR3
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE2346  1  42399  The pattern of gene expression in human CD34(+) stem/progenitor...  11717454
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_CALR3
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE2741  164  28195  Breast Tumor's study  16230372
GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...  
GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501
GSE5828  59  19916  Gene expression profiling classifies lung squamous cell...  17601969
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_CALR3
GSE2143  51  14443  Human coronary artery study  15942018
GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...  
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594
GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...  
GSE1511  6  19282  Gene expression profile of CD56dimCD16+, CD56brightCD16- and...  15557145
GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390
RNA sequences according to Unigene available on : June 11 2008
EMBL AK058084.1; AK058084. [EMBL / GenBank / DDBJ]
BC014595.2; BC014595. [EMBL / GenBank / DDBJ]
Last update March 2014