Nice View of CleanEx: HS_C5orf27

General information about the entry

Entry name  HS_C5orf27 Locus  5q15 Description of the gene  Chromosome 5 open reading frame 27.

Cross-references

Entrez GeneID  202299 Genomic contig  AC_000048. Position of TSS : 91066690 on plus strand (based on ANNOTATION)  AC_000137. Position of TSS : 90386399 on minus strand (based on ANNOTATION)  NC_000005. Position of TSS : 95213694 on plus strand (based on ANNOTATION)  NT_023148. Position of TSS : 3501810 on plus strand (based on ANNOTATION)  NW_001838952. Position of TSS : 43598208 on minus strand (based on ANNOTATION)  NW_922729. Position of TSS : 24466534 on plus strand (based on ANNOTATION) Unigene  Hs.8373 Genew  HGNC:24687; C5orf27 GeneCards  C5orf27 Ensembl  C5orf27 RefSeq SWISSPROT  Q52M75(CE027_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C5orf27 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C5orf27 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE10  4  96903  eye-SAGE  11756676 GSE505  2  8980  Serial analysis of gene expression in the corneal endothelium...  12556388 GSE608  2  31851  Human embryonic stem cells  14688391 GSE2346  1  42399  The pattern of gene expression in human CD34(+) stem/progenitor...  11717454

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C5orf27 R0002  295  24469  Survival in breast cancer.  12490681 GSE2003  64  9705  NCI cDNA microarray-human 60 cell lines  10700174 GSE112A  47  31487  Distinctive gene expression patterns in gastrointestinal...   GSE58  18  9706  Serum stimulation of fibroblasts  9872747 GSE55  12  9706  Serum stimulation of fibroblasts experiment set  9872747 GSE56  4  9706  Serum stimulation of fibroblasts with cycloheximide  9872747 GSE57  2  9706  Serum stimulation of fibroblasts controls  9872747

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C5orf27 GSE2845  311  24479  Human breast tumor   GSE2046  42  12426  Hep3B time-course   GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193 GSE2053  8  15075  RAvs.ND   GSE1510  5  34030  Human UniGene Set RZPD 1 - Zipf's Normalization   GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AK096140.1; AK096140. [EMBL / GenBank / DDBJ] AY168789.1; AY168789. [EMBL / GenBank / DDBJ] BC093643.1; BC093643. [EMBL / GenBank / DDBJ] BC101577.1; BC101577. [EMBL / GenBank / DDBJ]