Nice View of CleanEx: HS_C1orf58

General information about the entry

Entry name  HS_C1orf58 Locus  1q41 Description of the gene  Chromosome 1 open reading frame 58.

Cross-references

Entrez GeneID  148362 Genomic contig  AC_000044. Position of TSS : 196105073 on plus strand (based on ANNOTATION)  AC_000133. Position of TSS : 193580492 on minus strand (based on ANNOTATION)  NC_000001. Position of TSS : 220952528 on plus strand (based on ANNOTATION)  NT_021877. Position of TSS : 16403684 on plus strand (based on ANNOTATION)  NW_001838537. Position of TSS : 368394 on minus strand (based on ANNOTATION)  NW_926794. Position of TSS : 16270833 on plus strand (based on ANNOTATION) Unigene  Hs.552608 Genew  HGNC:26512; C1orf58 GeneCards  C1orf58 Ensembl  C1orf58 RefSeq  NM_144695  SWISSPROT  Q5VW32(BROX_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C1orf58 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C1orf58 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE10  4  96903  eye-SAGE  11756676 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2017  2  13386  Genomic alterations in primary hyperaldosteronism  16204365

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C1orf58 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C1orf58 GSE2845  311  24479  Human breast tumor   GSE4056  190  2895  Expression profiling of human primary breast cancer tissue...  16622258 GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193 GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217 GSE1133B  158  11391  tissue-specific pattern of mRNA expression  15075390

RNA sequences according to Unigene available on : June 11 2008

EMBL AB276123.1; AB276123. [EMBL / GenBank / DDBJ] AK056983.1; AK056983. [EMBL / GenBank / DDBJ] AK094916.1; AK094916. [EMBL / GenBank / DDBJ] BC053552.1; BC053552. [EMBL / GenBank / DDBJ] BC105293.1; BC105293. [EMBL / GenBank / DDBJ] BC113635.1; BC113635. [EMBL / GenBank / DDBJ] BC113637.1; BC113637. [EMBL / GenBank / DDBJ]