Nice View of CleanEx: HS_C19orf41

General information about the entry

Entry name  HS_C19orf41 Locus  19q13.33 Description of the gene  Chromosome 19 open reading frame 41.

Cross-references

Entrez GeneID  126123 Genomic contig  AC_000062. Position of TSS : 47716709 on minus strand (based on ANNOTATION)  AC_000151. Position of TSS : 46994968 on plus strand (based on ANNOTATION)  NC_000019. Position of TSS : 55358349 on minus strand (based on ANNOTATION)  NT_011109. Position of TSS : 22934727 on minus strand (based on ANNOTATION)  NW_001838498. Position of TSS : 5260207 on plus strand (based on ANNOTATION)  NW_927284. Position of TSS : 23993 on minus strand (based on ANNOTATION) Unigene  Hs.414175 Genew  HGNC:28518; C19orf41 GeneCards  C19orf41 Ensembl  C19orf41 RefSeq  NM_152358  SWISSPROT  Q6UXV1(CS041_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C19orf41 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB   GSE1145B  90  54675  changes in cardiac transcription profiles brought about by...

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C19orf41 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2056  3  29318  PBECs stimulated with pro-inflammatory cytokines and P....  15701729

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C19orf41 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501 GSE3901  120  45982  Response of quiescent human fibroblasts to different growth...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C19orf41 GSE2845  311  24479  Human breast tumor   GSE2143  51  14443  Human coronary artery study  15942018 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193

RNA sequences according to Unigene available on : June 11 2008

EMBL AK131024.1; AK131024. [EMBL / GenBank / DDBJ] AY358196.1; AY358196. [EMBL / GenBank / DDBJ] BC029535.1; BC029535. [EMBL / GenBank / DDBJ]