Nice View of CleanEx: HS_C17orf62

General information about the entry

Entry name  HS_C17orf62 Locus  17q25.3 Description of the gene  Chromosome 17 open reading frame 62.

Cross-references

Entrez GeneID  79415 Genomic contig  AC_000060. Position of TSS : 77000118 on minus strand (based on ANNOTATION)  AC_000149. Position of TSS : 75806802 on minus strand (based on ANNOTATION)  NC_000017. Position of TSS : 78001982 on minus strand (based on ANNOTATION)  NT_010663. Position of TSS : 622800 on minus strand (based on ANNOTATION)  NW_001838459. Position of TSS : 653731 on minus strand (based on ANNOTATION)  NW_926918. Position of TSS : 17505519 on minus strand (based on ANNOTATION) Unigene  Hs.163113 Genew  HGNC:28672; C17orf62 GeneCards  C17orf62 Ensembl  C17orf62 RefSeq  NM_001033046   NM_001100407   NM_001100408  SWISSPROT  Q9BQA9(CQ062_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C17orf62 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012 GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694 GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...   GSE2034  286  22283  Breast cancer relapse free survival  15721472 GSE3494A  251  22283  An expression signature for p53 in breast cancer predicts...  16141321 GSE7390  198  22283  Strong Time Dependence of the 76-Gene Prognostic Signature  17545524 GSE2990  189  22283  Gene Expression Profiling in Breast Cancer: Understanding the...  16478745

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C17orf62 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C17orf62 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE60  133  18613  Diffuse large B-cell lymphoma  10676951

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C17orf62 GSE2845  311  24479  Human breast tumor   GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...   GSE2143  51  14443  Human coronary artery study  15942018 GSE2046  42  12426  Hep3B time-course   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2075  14  23879  Rosetta_miRNA_transfection_experiment  15685193 GSE1433  12  9215  TIAR represses c-Myc biosynthesis following ultraviolet light...  16537914

RNA sequences according to Unigene available on : June 11 2008

EMBL AF269290.1; AF269290. [EMBL / GenBank / DDBJ] AK027743.1; AK027743. [EMBL / GenBank / DDBJ] AK054876.1; AK054876. [EMBL / GenBank / DDBJ] AK056342.1; AK056342. [EMBL / GenBank / DDBJ] AK074950.1; AK074950. [EMBL / GenBank / DDBJ] AK090484.1; AK090484. [EMBL / GenBank / DDBJ] AK092865.1; AK092865. [EMBL / GenBank / DDBJ] AK225389.1; AK225389. [EMBL / GenBank / DDBJ] BC003595.1; BC003595. [EMBL / GenBank / DDBJ] BC004171.2; BC004171. [EMBL / GenBank / DDBJ]