Nice View of CleanEx: HS_C10orf54

General information about the entry

Entry name  HS_C10orf54 Locus  10q22.1 Description of the gene  Chromosome 10 open reading frame 54.

Cross-references

Entrez GeneID  64115 Genomic contig  AC_000053. Position of TSS : 66815910 on minus strand (based on ANNOTATION)  AC_000142. Position of TSS : 67501145 on plus strand (based on ANNOTATION)  NC_000010. Position of TSS : 73203342 on minus strand (based on ANNOTATION)  NT_008583. Position of TSS : 22084491 on minus strand (based on ANNOTATION)  NW_001837987. Position of TSS : 7929037 on plus strand (based on ANNOTATION)  NW_924796. Position of TSS : 21010153 on minus strand (based on ANNOTATION) Unigene  Hs.47382 Genew  HGNC:30085; C10orf54 GeneCards  C10orf54 Ensembl  C10orf54 RefSeq  NM_022153  SWISSPROT  Q9H7M9(GI24_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C10orf54 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919B  167  12620  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C10orf54 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE10  4  96903  eye-SAGE  11756676 GSE41  4  36402  Effects of estrogen  11085516

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C10orf54 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2283B  136  5204  Primary human neuroblastoma  15837623

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_C10orf54 GSE1440  140  9131  TIAR represses c-Myc biosynthesis following ultraviolet light...   GSE2143  51  14443  Human coronary artery study  15942018 GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692 GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE1433  12  9215  TIAR represses c-Myc biosynthesis following ultraviolet light...  16537914

RNA sequences according to Unigene available on : June 11 2008

EMBL AB073653.1; AB073653. [EMBL / GenBank / DDBJ] AF193048.1; AF193048. [EMBL / GenBank / DDBJ] AK024449.1; AK024449. [EMBL / GenBank / DDBJ] AY265805.1; AY265805. [EMBL / GenBank / DDBJ] AY358379.1; AY358379. [EMBL / GenBank / DDBJ] BC020568.1; BC020568. [EMBL / GenBank / DDBJ] BC111048.1; BC111048. [EMBL / GenBank / DDBJ] BC127257.1; BC127257. [EMBL / GenBank / DDBJ] EF506490.1; EF506490. [EMBL / GenBank / DDBJ]