Nice View of CleanEx: HS_BGLAP

General information about the entry

Entry name  HS_BGLAP Locus  1q25-q31 Description of the gene  Bone gamma-carboxyglutamate (gla) protein.

Cross-references

Entrez GeneID  632 Genomic contig  AC_000044. Position of TSS : 129284986 on plus strand (based on ANNOTATION)  AC_000133. Position of TSS : 127574211 on minus strand (based on ANNOTATION)  NC_000001. Position of TSS : 154478628 on plus strand (based on ANNOTATION)  NT_004487. Position of TSS : 6702359 on plus strand (based on ANNOTATION)  NW_001838531. Position of TSS : 5193352 on minus strand (based on ANNOTATION)  NW_925683. Position of TSS : 6321812 on plus strand (based on ANNOTATION) Unigene  Hs.654541 MIM  112260 Genew  HGNC:1043; BGLAP GeneCards  BGLAP Ensembl  BGLAP RefSeq  NM_199173  SWISSPROT  P02818(OSTC_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_BGLAP GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142 GSE1485  355  8793  Natural variation in human gene expression  15269782 GSE2350  336  12600  Normal and transformed human mature B cells  15778709 GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012 GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694 GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...   GSE2034  286  22283  Breast cancer relapse free survival  15721472

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_BGLAP GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE31  5  23628  SAGE_HumanEpidermis  11772949 GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891 GSE41  4  36402  Effects of estrogen  11085516 GSE514  4  55481  AIDS-related Kaposi's sarcoma  12697073 GSE506  2  9619  Fibroblast cells immediate-early after human cytomegalovirus...  11124023

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_BGLAP GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...   GSE2193  123  47017  Normal_human_tissues  15774023 GSE2607  123  28195  Biological Classification of Breast Cancer by Real-Time...  16626501

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_BGLAP GSE2046  42  12426  Hep3B time-course   GSE6752  31  18647  CodeLink Expression Data from primary prostate tumor and...  17430594 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...   GSE2182  12  8155  Drug treatment comparison   GSE2243  8  41419  RIZ1 repression is associated with insulin-like growth factor-1...  16953217

RNA sequences according to Unigene available on : June 11 2008

EMBL BC113432.1; BC113432. [EMBL / GenBank / DDBJ] BC113434.1; BC113434. [EMBL / GenBank / DDBJ] X51699.1; X51699. [EMBL / GenBank / DDBJ] X53698.1; X53698. [EMBL / GenBank / DDBJ]