Nice View of CleanEx : HS_BCR

Nice View of CleanEx: HS_BCR

This viewer shows only the top ten expression datasets of each type linked to HS_BCR

To see the full entry, go to HS_BCR full view

[General] [RNA sequences] [Cross-references] [Affymetrix data] [COUNTS data] [Dual Channel data] [Other datasets]



 

General information about the entry
Entry name  HS_BCR
Locus  22q11
Description of the gene  Breakpoint cluster region.
Cross-references
Entrez GeneID  613
Genomic contig  AC_000065. Position of TSS : 7337082 on plus strand (based on ANNOTATION)
 AC_000154. Position of TSS : 6491127 on plus strand (based on ANNOTATION)
 NC_000022. Position of TSS : 21852551 on plus strand (based on ANNOTATION)
 NT_011520. Position of TSS : 2913120 on plus strand (based on ANNOTATION)
 NW_001838745. Position of TSS : 1618260 on plus strand (based on ANNOTATION)
 NW_927628. Position of TSS : 1603276 on plus strand (based on ANNOTATION)
Unigene  Hs.715409
MIM  151410
Genew  HGNC:1014; BCR
GeneCards  BCR
Ensembl  BCR
RefSeq
 NM_004327   NM_021574 
SWISSPROT
 P11274(BCR_HUMAN) 
EPD
Affymetrix Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_BCR
GSE2109  870  54675  Expression Project for Oncology (expO)  
GSE7307  677  54675  Human body index - transcriptional profiling  
GSE5859A  507  8793  Allelic Differences Account for Gene Expression Differences...  17206142
GSE1485  355  8793  Natural variation in human gene expression  15269782
GSE2350  336  12600  Normal and transformed human mature B cells  15778709
GSE6532A  327  22283  Definition of clinically distinct molecular subtypes in...  17401012
GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012
GSE1159  293  22283  Expression profiles of acute myeloid leukemia patient samples...  15084694
GSE4922A  289  22283  Genetic Reclassification of Histologic Grade Delineates New...  
COUNTS (SAGE or MPSS) Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_BCR
GSE14  210  603158  CGAP SAGE  11257097
GSE1747  32  320452  Human 32 MPSS samples  
GSE1902  29  632194  Cancer Genome Anatomy Project (Human: longSAGE)  
HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440
GSE694  8  92782  SADE analysis of microdissected kidney  14595018
GSE31  5  23628  SAGE_HumanEpidermis  11772949
GSE545  5  38903  SAGE Hiroshima gastric cancer tissue  15059891
GSE10  4  96903  eye-SAGE  11756676
GSE41  4  36402  Effects of estrogen  11085516
Dual Channel Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_BCR
R0002  295  24469  Survival in breast cancer.  12490681
GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798
GSE3165A  188  28195  Identification of conserved gene expression features across...  
GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109
GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655
GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416
GSE1726  167  14108  Rosetta_Merck_CEPH_Study  15514893
GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800
GSE2741  164  28195  Breast Tumor's study  16230372
Other Expression Data References
Dataset's Name Number
of
Experiments
Number
of
Features
Dataset's Title PMID Features viewer
for
HS_BCR
GSE2845  311  24479  Human breast tumor  
GSE4882  125  665  A Gene Expression Signature to Predict Metastasis and Survival...  17202451
GSE137  70  10368  Natural variation in human gene expression assessed in...  12567189
GSE2143  51  14443  Human coronary artery study  15942018
GSE4716A  50  5352  Gene expression-based, individualized outcome prediction for...  15064725
GSE2046  42  12426  Hep3B time-course  
GSE1434  32  11519  HaCaT +GLI1/2 24/72h  16434164
GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186
GSE1767  31  19215  Human blood expression for Huntington's disease versus control,...  16043692
RNA sequences according to Unigene available on : June 11 2008
EMBL AB209991.1; AB209991. [EMBL / GenBank / DDBJ]
AF174606.1; AF174606. [EMBL / GenBank / DDBJ]
AF192533.1; AF192533. [EMBL / GenBank / DDBJ]
AF321981.1; AF321981. [EMBL / GenBank / DDBJ]
AF487522.1; AF487522. [EMBL / GenBank / DDBJ]
AK024483.1; AK024483. [EMBL / GenBank / DDBJ]
AK122842.1; AK122842. [EMBL / GenBank / DDBJ]
AK128501.1; AK128501. [EMBL / GenBank / DDBJ]
AK303241.1; AK303241. [EMBL / GenBank / DDBJ]
AM491360.1; AM491360. [EMBL / GenBank / DDBJ]
AY533677.1; AY533677. [EMBL / GenBank / DDBJ]
AY536244.1; AY536244. [EMBL / GenBank / DDBJ]
AY536245.1; AY536245. [EMBL / GenBank / DDBJ]
AY536246.1; AY536246. [EMBL / GenBank / DDBJ]
AY536247.1; AY536247. [EMBL / GenBank / DDBJ]
AY536248.1; AY536248. [EMBL / GenBank / DDBJ]
AY536249.1; AY536249. [EMBL / GenBank / DDBJ]
AY536250.1; AY536250. [EMBL / GenBank / DDBJ]
BC041705.1; BC041705. [EMBL / GenBank / DDBJ]
BC053641.1; BC053641. [EMBL / GenBank / DDBJ]
BC063619.1; BC063619. [EMBL / GenBank / DDBJ]
BC066122.1; BC066122. [EMBL / GenBank / DDBJ]
BC083493.1; BC083493. [EMBL / GenBank / DDBJ]
BC127668.1; BC127668. [EMBL / GenBank / DDBJ]
DQ898313.1; DQ898313. [EMBL / GenBank / DDBJ]
DQ898315.1; DQ898315. [EMBL / GenBank / DDBJ]
DQ912588.1; DQ912588. [EMBL / GenBank / DDBJ]
DQ912589.1; DQ912589. [EMBL / GenBank / DDBJ]
DQ912590.1; DQ912590. [EMBL / GenBank / DDBJ]
EU154998.1; EU154998. [EMBL / GenBank / DDBJ]
EU216058.1; EU216058. [EMBL / GenBank / DDBJ]
EU216059.1; EU216059. [EMBL / GenBank / DDBJ]
EU216061.1; EU216061. [EMBL / GenBank / DDBJ]
EU216062.1; EU216062. [EMBL / GenBank / DDBJ]
EU216063.1; EU216063. [EMBL / GenBank / DDBJ]
EU216064.1; EU216064. [EMBL / GenBank / DDBJ]
EU216065.1; EU216065. [EMBL / GenBank / DDBJ]
EU216067.1; EU216067. [EMBL / GenBank / DDBJ]
EU216068.1; EU216068. [EMBL / GenBank / DDBJ]
EU216069.1; EU216069. [EMBL / GenBank / DDBJ]
EU216070.1; EU216070. [EMBL / GenBank / DDBJ]
EU216072.1; EU216072. [EMBL / GenBank / DDBJ]
EU236680.1; EU236680. [EMBL / GenBank / DDBJ]
EU394716.1; EU394716. [EMBL / GenBank / DDBJ]
EU394717.1; EU394717. [EMBL / GenBank / DDBJ]
EU394718.1; EU394718. [EMBL / GenBank / DDBJ]
S72478.1; S72478. [EMBL / GenBank / DDBJ]
S72479.1; S72479. [EMBL / GenBank / DDBJ]
X02596.1; X02596. [EMBL / GenBank / DDBJ]
X06418.1; X06418. [EMBL / GenBank / DDBJ]
X14675.1; X14675. [EMBL / GenBank / DDBJ]
X14676.1; X14676. [EMBL / GenBank / DDBJ]
X14677.1; X14677. [EMBL / GenBank / DDBJ]
Y00661.1; Y00661. [EMBL / GenBank / DDBJ]
BC071742.1; BC071742. [EMBL / GenBank / DDBJ]