Nice View of CleanEx: HS_ALS2CR12

General information about the entry

Entry name  HS_ALS2CR12 Locus  2q33.1 Description of the gene  Amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12.

Cross-references

Entrez GeneID  130540 Genomic contig  AC_000045. Position of TSS : 195968023 on minus strand (based on ANNOTATION)  AC_000134. Position of TSS : 194064592 on minus strand (based on ANNOTATION)  NC_000002. Position of TSS : 201924420 on minus strand (based on ANNOTATION)  NG_007497. Position of TSS : 61251 on minus strand (based on ANNOTATION)  NT_005403. Position of TSS : 52425592 on minus strand (based on ANNOTATION)  NW_001838863. Position of TSS : 27620898 on minus strand (based on ANNOTATION)  NW_921618. Position of TSS : 6882553 on minus strand (based on ANNOTATION) Unigene  Hs.107944 Genew  HGNC:14439; ALS2CR12 GeneCards  ALS2CR12 Ensembl  ALS2CR12 RefSeq  NM_001127391   NM_139163  SWISSPROT  Q96Q35(AL2SB_HUMAN)  EPD

Affymetrix Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ALS2CR12 GSE2109  870  54675  Expression Project for Oncology (expO)   GSE7307  677  54675  Human body index - transcriptional profiling   GSE6532B  327  22645  Definition of clinically distinct molecular subtypes in...  17401012 GSE4922B  289  22645  Genetic Reclassification of Histologic Grade Delineates New...   GSE3494B  251  22645  An expression signature for p53 in breast cancer predicts...  16141321 GSE6919C  164  12646  Expression Data from Normal and Prostate Tumor Tissues  17430594 GSE1456B  159  22645  Gene expression of breast cancer tissue in a large...  16280042 GSE3141  111  54675  Lung Cancer Dataset  16273092 GSE1427B  99  22645  Expression profiles in Blast Bank samples with AML/RAEB

COUNTS (SAGE or MPSS) Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ALS2CR12 GSE14  210  603158  CGAP SAGE  11257097 GSE1747  32  320452  Human 32 MPSS samples   HSEST  17  18349  Tissue break-down of ESTs derived from Unigene clusters  8849440 GSE694  8  92782  SADE analysis of microdissected kidney  14595018 GSE953  4  53800  Effect of TERT and ATM on Gene Expression Profiles in Human...  14978791 GSE2017  2  13386  Genomic alterations in primary hyperaldosteronism  16204365 GSE506  2  9619  Fibroblast cells immediate-early after human cytomegalovirus...  11124023 GSE508  2  30803  Targets of c-Jun NH(2)-terminal kinase 2-mediated tumor growth...  12036942 GSE608  2  31851  Human embryonic stem cells  14688391

Dual Channel Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ALS2CR12 R0002  295  24469  Survival in breast cancer.  12490681 GSE6128  191  28554  EGFR signaling varies with breast tumor subtype  17663798 GSE3165A  188  28195  Identification of conserved gene expression features across...   GSE1898  182  21533  Human Hepatocellular Carcinoma study  15565109 GSE1992  170  28554  A New Breast Tumor Intrinsic Gene List Identifies Novel...  16643655 GSE2740  169  44916  Estrogen-regulated genes predict survival in estrogen receptor...  16505416 GSE4382  167  47015  Repeated observation of breast tumor subtypes in independent...  12829800 GSE2741  164  28195  Breast Tumor's study  16230372 GSE6130  141  28195  Agreement in Breast Cancer Classification between Microarray...

Other Expression Data References

Dataset's Name Number of Experiments Number of Features Dataset's Title PMID Features viewer for HS_ALS2CR12 GSE2845  311  24479  Human breast tumor   GSE4056  190  2895  Expression profiling of human primary breast cancer tissue...  16622258 GSE2143  51  14443  Human coronary artery study  15942018 GSE4716B  50  5352  Gene expression-based, individualized outcome prediction for...  15064725 GSE3155A  40  24516  Gene expression profiling of the 20 human early breast...   GSE1710  31  34030  Expression profiling in inflammatory bowel disease  16107186 GSE2097  22  17567  Epigenetic treatment of cervical carcinoma cell lines  16434596 GSE3155B  20  34671  Gene expression profiling of the 20 human early breast...   GSE3155C  20  38993  Gene expression profiling of the 20 human early breast...

RNA sequences according to Unigene available on : June 11 2008

EMBL AB053314.1; AB053314. [EMBL / GenBank / DDBJ] AK124115.1; AK124115. [EMBL / GenBank / DDBJ] AK292283.1; AK292283. [EMBL / GenBank / DDBJ] BC031603.1; BC031603. [EMBL / GenBank / DDBJ]